RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 PTPN7P35236 360 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 CDKN2BP42772 138 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 DSC3Q14574 896 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 TAF5Q15542 800 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 KCNT1Q5JUK3 1230 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 IZUMO3Q5VZ72 239 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 POLNQ7Z5Q5 900 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 CLNKQ7Z7G1 428 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 MRPL10Q7Z7H8 261 aaKnown RBP15.85■□□□□ 0.13
PNKP-204ENST00000594661 TOP6BLQ8N6T0 577 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 DQX1Q8TE96 717 aaKnown RBP15.85■□□□□ 0.13
PNKP-204ENST00000594661 PXYLP1Q8TE99 480 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 CYLDQ9NQC7 956 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 SLC38A7Q9NVC3 462 aa15.85■□□□□ 0.13
PNKP-204ENST00000594661 TUBA8Q9NY65 449 aaPredicted RBP15.85■□□□□ 0.13
PNKP-204ENST00000594661 C2CD4BA6NLJ0 364 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 CYB561D2O14569 222 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 CABYRO75952 493 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 WARSP23381 471 aaKnown RBP15.84■□□□□ 0.13
PNKP-204ENST00000594661 TKTP29401 623 aaKnown RBP15.84■□□□□ 0.13
PNKP-204ENST00000594661 ACADVLP49748 655 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 VEGFBP49765 207 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 CLCNKBP51801 687 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 WDR4P57081 412 aaKnown RBP15.84■□□□□ 0.13
PNKP-204ENST00000594661 GEMIN4P57678 1058 aaKnown RBP15.84■□□□□ 0.13
PNKP-204ENST00000594661 CDC16Q13042 620 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 HADHQ16836 314 aaKnown RBP15.84■□□□□ 0.13
PNKP-204ENST00000594661 RAB6CQ53S08 254 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 SH3PXD2AQ5TCZ1 1133 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 WSCD1Q658N2 575 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 TMEM110Q86TL2 294 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 NUP93Q8N1F7 819 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 RNF169Q8NCN4 708 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 C3orf58Q8NDZ4 430 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 SLC2A14Q8TDB8 520 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 PWWP2AQ96N64 755 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 B3GNT5Q9BYG0 378 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 RAB6CQ9H0N0 254 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 USP29Q9HBJ7 922 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 PFDN4Q9NQP4 134 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 PCSK1NQ9UHG2 260 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 GIT1Q9Y2X7 761 aa15.84■□□□□ 0.13
PNKP-204ENST00000594661 C3orf70A6NLC5 250 aaPredicted RBP15.83■□□□□ 0.13
PNKP-204ENST00000594661 MAGEB3O15480 346 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 PAPSS1O43252 624 aaPredicted RBP15.83■□□□□ 0.13
PNKP-204ENST00000594661 AP1G1O43747 822 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 OR6B1O95007 311 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 KRT7P08729 469 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 ANPEPP15144 967 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 GPD1P21695 349 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 ACAT1P24752 427 aaKnown RBP15.83■□□□□ 0.13
PNKP-204ENST00000594661 MIPP30301 263 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 ZNF143P52747 638 aaPredicted RBP15.83■□□□□ 0.13
PNKP-204ENST00000594661 PDE1BQ01064 536 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 SPIDRQ14159 915 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 LHX8Q68G74 356 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 DRICH1Q6PGQ1 229 aaPredicted RBP15.83■□□□□ 0.13
PNKP-204ENST00000594661 SCUBE3Q8IX30 993 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 ANKRD52Q8NB46 1076 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 RXFP2Q8WXD0 754 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 DHRS1Q96LJ7 313 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 PAAF1Q9BRP4 392 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 TRPV6Q9H1D0 765 aa15.83■□□□□ 0.13
PNKP-204ENST00000594661 CASTOR2A6NHX0 329 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 BOLA2-SMG1P6H3BVE0 249 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 OPHN1O60890 802 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 TTC4O95801 387 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 BCAT1P54687 386 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 BST2Q10589 180 aaKnown RBP15.83■□□□□ 0.12
PNKP-204ENST00000594661 DNAJC3Q13217 504 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 BCL2A1Q16548 175 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 KYNUQ16719 465 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 C15orf59Q2T9L4 293 aaPredicted RBP15.83■□□□□ 0.12
PNKP-204ENST00000594661 FAM26DQ5JW98 314 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 GRAMD4Q6IC98 578 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 NLRP9Q7RTR0 991 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 GLIS1Q8NBF1 620 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 B3GALNT2Q8NCR0 500 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 PIP4K2CQ8TBX8 421 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 KHSRPQ92945 711 aaKnown RBP eCLIP15.83■□□□□ 0.12
PNKP-204ENST00000594661 GLT1D1Q96MS3 346 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 PRICKLE1Q96MT3 831 aaPredicted RBP15.83■□□□□ 0.12
PNKP-204ENST00000594661 ADAM2Q99965 735 aa15.83■□□□□ 0.12
PNKP-204ENST00000594661 FAM47DPA6NHR8 397 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 ZNF623O75123 536 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 ZSCAN5DPP0CG00 497 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 PDGFRAP16234 1089 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 ARSEP51690 589 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 RAP1GDS1P52306 607 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 VCPP55072 806 aaKnown RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 HDAC4P56524 1084 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 DYNLT1P63172 113 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 HTRA3P83110 453 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 SLC6A3Q01959 620 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 PLCB3Q01970 1234 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 PDCD4Q53EL6 469 aaKnown RBP15.82■□□□□ 0.12
PNKP-204ENST00000594661 Q6ZNX1 250 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 ALLCQ8N6M5 410 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 CLEC4CQ8WTT0 213 aa15.82■□□□□ 0.12
PNKP-204ENST00000594661 SENP8Q96LD8 212 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms