RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 LINC00597Q9H2U6 94 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 KIF9Q9HAQ2 790 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 LMAN1LQ9HAT1 526 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 LUC7LQ9NQ29 371 aaKnown RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 RBM12Q9NTZ6 932 aaKnown RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 DUS2Q9NX74 493 aaKnown RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 IP6K2Q9UHH9 426 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 AGO1Q9UL18 857 aaKnown RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 STAP1Q9ULZ2 295 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 MRPS17Q9Y2R5 130 aaKnown RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 MFHAS1Q9Y4C4 1052 aa10□□□□□ -0.81
DDX39A-220ENST00000593008 KIF26AQ9ULI4 1882 aaPredicted RBP10□□□□□ -0.81
DDX39A-220ENST00000593008 F5P12259 2224 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 VPS13AQ96RL7 3174 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 KCNU1A8MYU2 1149 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 MYO1FO00160 1098 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 TSPAN3O60637 253 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 ENDOD1O94919 500 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 IFNAR2P48551 515 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 HADHBP55084 474 aaKnown RBP9.99□□□□□ -0.81
DDX39A-220ENST00000593008 FAM133BQ5BKY9 247 aaKnown RBP9.99□□□□□ -0.81
DDX39A-220ENST00000593008 FAM182AQ5T1J6 154 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 KLHDC10Q6PID8 442 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 Q6ZNB5 142 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 STRADAQ7RTN6 431 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 DAAM2Q86T65 1068 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 C1orf210Q8IVY1 113 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 ZNF687Q8N1G0 1237 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 FNIP1Q8TF40 1166 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 OSCP1Q8WVF1 389 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 HSPH1Q92598 858 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 ALG3Q92685 438 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 CD101Q93033 1021 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 BHMTQ93088 406 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 RNF34Q969K3 372 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 TRIM44Q96DX7 344 aaPredicted RBP9.99□□□□□ -0.81
DDX39A-220ENST00000593008 WDR24Q96S15 920 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 NELL2Q99435 816 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 PSMB7Q99436 277 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 OSBPL6Q9BZF3 934 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 C8orf33Q9H7E9 229 aaPredicted RBP9.99□□□□□ -0.81
DDX39A-220ENST00000593008 OLA1Q9NTK5 396 aaKnown RBP9.99□□□□□ -0.81
DDX39A-220ENST00000593008 NEU3Q9UQ49 428 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 TLR6Q9Y2C9 796 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 HS3ST4Q9Y661 456 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 ALG6Q9Y672 507 aa9.99□□□□□ -0.81
DDX39A-220ENST00000593008 TICRRQ7Z2Z1 1910 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ENC1O14682 589 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 NCAM2O15394 837 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 DDX3YO15523 660 aaKnown RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ZSCAN12O43309 604 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 SPOPO43791 374 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 RARAP10276 462 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 CHRNB1P11230 501 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 MAN1A1P33908 653 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 MTAPQ13126 283 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 MMRN1Q13201 1228 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ZNF211Q13398 564 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 PDGFRLQ15198 375 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 KCTD19Q17RG1 926 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 EML3Q32P44 896 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ZNF569Q5MCW4 686 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 DCAF12L1Q5VU92 463 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 TSSK4Q6SA08 328 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ZNF662Q6ZS27 426 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 Q6ZS52 159 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 SLFN11Q7Z7L1 901 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 NT5DC3Q86UY8 548 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ALYREFQ86V81 257 aaKnown RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 RALGPS2Q86X27 583 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 MAML2Q8IZL2 1156 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 CFAP52Q8N1V2 620 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 RAPGEF5Q92565 580 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ATP2A3Q93084 1043 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 IGSF8Q969P0 613 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 CLDN23Q96B33 292 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 PLD4Q96BZ4 506 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 CHFRQ96EP1 664 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 PGAP3Q96FM1 320 aaPredicted RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 TSGA10Q9BZW7 698 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 SIK2Q9H0K1 926 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ECT2Q9H8V3 914 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 ARHGEF38Q9NXL2 777 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 SMARCAL1Q9NZC9 954 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 FZD10Q9ULW2 581 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 CLEC4EQ9ULY5 219 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 USP18Q9UMW8 372 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 AP4E1Q9UPM8 1137 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 HBS1LQ9Y450 684 aaKnown RBP9.98□□□□□ -0.81
DDX39A-220ENST00000593008 MYO15AQ9UKN7 3530 aa9.98□□□□□ -0.81
DDX39A-220ENST00000593008 COL4A2P08572 1712 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 ANTXRLA6NF34 631 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 TRIM24O15164 1050 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 LAMTOR5O43504 91 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 KRT86O43790 486 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 CNTN5O94779 1100 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 APOEP02649 317 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 KRT1P04264 644 aa9.97□□□□□ -0.81
DDX39A-220ENST00000593008 ATP1A1P05023 1023 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms