RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 TMPRSS4Q9NRS4 437 aa21.48■■□□□ 1.03
DNMT1-227ENST00000592342 INTUQ9ULD6 942 aa21.48■■□□□ 1.03
DNMT1-227ENST00000592342 VANGL2Q9ULK5 521 aa21.48■■□□□ 1.03
DNMT1-227ENST00000592342 BDP1A6H8Y1 2624 aa21.48■■□□□ 1.03
DNMT1-227ENST00000592342 KAT7O95251 611 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 LCA5LO95447 670 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 DCNP07585 359 aaKnown RBP21.47■■□□□ 1.03
DNMT1-227ENST00000592342 HOXD9P28356 352 aaPredicted RBP21.47■■□□□ 1.03
DNMT1-227ENST00000592342 ADRA1BP35368 520 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 GRIA2P42262 883 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 SGSHP51688 502 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 RPS24P62847 133 aaKnown RBP21.47■■□□□ 1.03
DNMT1-227ENST00000592342 PIGHQ14442 188 aaPredicted RBP21.47■■□□□ 1.03
DNMT1-227ENST00000592342 ACAP1Q15027 740 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 FSTL4Q6MZW2 842 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 FBXL22Q6P050 247 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 CFAP52Q8N1V2 620 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 ZNF557Q8N988 423 aaPredicted RBP21.47■■□□□ 1.03
DNMT1-227ENST00000592342 NTAN1Q96AB6 310 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 PRMT1Q99873 361 aaKnown RBP21.47■■□□□ 1.03
DNMT1-227ENST00000592342 SLC2A11Q9BYW1 496 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 FBRSL1Q9HCM7 1045 aaKnown RBP21.47■■□□□ 1.03
DNMT1-227ENST00000592342 ANLNQ9NQW6 1124 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 PCDHA13Q9Y5I0 950 aa21.47■■□□□ 1.03
DNMT1-227ENST00000592342 TBC1D3BA6NDS4 549 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 GFRA2O00451 464 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 PI15O43692 258 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 EGFP01133 1207 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 ZNF252P-AS1Q0IIN9 211 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 EFHC2Q5JST6 749 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 TTC39BQ5VTQ0 682 aaPredicted RBP21.46■■□□□ 1.03
DNMT1-227ENST00000592342 RAD9BQ6WBX8 426 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 MFN1Q8IWA4 741 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 RHOT2Q8IXI1 618 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 CARNMT1Q8N4J0 409 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 CCDC185Q8N715 623 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 CCDC26Q8TAB7 109 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 BTBD6Q96KE9 485 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 C1orf74Q96LT6 269 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 RBM12Q9NTZ6 932 aaKnown RBP21.46■■□□□ 1.03
DNMT1-227ENST00000592342 LCMT1Q9UIC8 334 aa21.46■■□□□ 1.03
DNMT1-227ENST00000592342 H0Y626 953 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 NRDCO43847 1150 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 PRPSAP2O60256 369 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 SRGAP2O75044 1071 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 CHRNB1P11230 501 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 AIF1P55008 147 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 CDH18Q13634 790 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 FBXO43Q4G163 708 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 TMEM139Q8IV31 216 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 SLC35G2Q8TBE7 412 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 RFFLQ8WZ73 363 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 MYEOVQ96EZ4 313 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 P2RY11Q96G91 374 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 LRFN3Q9BTN0 628 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 PCSK1NQ9UHG2 260 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 SNX10Q9Y5X0 201 aa21.45■■□□□ 1.02
DNMT1-227ENST00000592342 I6L893 689 aaPredicted RBP21.44■■□□□ 1.02
DNMT1-227ENST00000592342 TRIM24O15164 1050 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 LUC7L3O95232 432 aaKnown RBP21.44■■□□□ 1.02
DNMT1-227ENST00000592342 AVPR2P30518 371 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 SSR1P43307 286 aaKnown RBP21.44■■□□□ 1.02
DNMT1-227ENST00000592342 MAGEA9P43362 315 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 KRT83P78385 493 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 CCINQ13939 588 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 C14orf80Q86SX3 495 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 SYNPOQ8N3V7 929 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 TMEM105Q8N8V8 129 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 TERB1Q8NA31 727 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 CCDC112Q8NEF3 446 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 IGSF8Q969P0 613 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 OSGEPQ9NPF4 335 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 OR12D3Q9UGF7 316 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 FBXO10Q9UK96 956 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 CLEC4EQ9ULY5 219 aa21.44■■□□□ 1.02
DNMT1-227ENST00000592342 MYOFQ9NZM1 2061 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 A0A1B0GVM2 712 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 TCAF2A6NFQ2 919 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 E9PAM4 449 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 LRCH4O75427 683 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 CISD3P0C7P0 127 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 MIPP30301 263 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 RPS9P46781 194 aaKnown RBP21.43■■□□□ 1.02
DNMT1-227ENST00000592342 SEC13P55735 322 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 SCAPQ12770 1279 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 ANKS1BQ7Z6G8 1248 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 CIR1Q86X95 450 aaPredicted RBP21.43■■□□□ 1.02
DNMT1-227ENST00000592342 CCAR2Q8N163 923 aaKnown RBP21.43■■□□□ 1.02
DNMT1-227ENST00000592342 ZNF687Q8N1G0 1237 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 PHTF2Q8N3S3 785 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 CLDN23Q96B33 292 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 OSBPL2Q9H1P3 480 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 FZD10Q9ULW2 581 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 SLC27A6Q9Y2P4 619 aa21.43■■□□□ 1.02
DNMT1-227ENST00000592342 TMEM110-MUSTN1A8MSY1 372 aa21.42■■□□□ 1.02
DNMT1-227ENST00000592342 RNF40O75150 1001 aa21.42■■□□□ 1.02
DNMT1-227ENST00000592342 PCK1P35558 622 aa21.42■■□□□ 1.02
DNMT1-227ENST00000592342 TNFRSF4P43489 277 aa21.42■■□□□ 1.02
DNMT1-227ENST00000592342 NOP2P46087 812 aaKnown RBP21.42■■□□□ 1.02
DNMT1-227ENST00000592342 MESP2Q0VG99 397 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms