RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 SMPD4Q9NXE4 827 aa23.5■■□□□ 1.35
SPHK1-210ENST00000592299 E9PAM4 449 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 XYLBO75191 536 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 ITGAVP06756 1048 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 HNRNPA1P09651 372 aaKnown RBP eCLIP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 IRF1P10914 325 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 PTPN2P17706 415 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 NR2C2P49116 596 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 SLC10A2Q12908 348 aaPredicted RBP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 TRADDQ15628 312 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 TRIP13Q15645 432 aaPredicted RBP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 DARS2Q6PI48 645 aaKnown RBP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 C14orf80Q86SX3 495 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 CCDC33Q8N5R6 958 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 TBC1D31Q96DN5 1066 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 GDF3Q9NR23 364 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 ARGLU1Q9NWB6 273 aaPredicted RBP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 DTLQ9NZJ0 730 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 VANGL2Q9ULK5 521 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 ATG2AQ2TAZ0 1938 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 MFSD11O43934 449 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 RBM10P98175 930 aaKnown RBP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 RAP1GAP2Q684P5 730 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 CHRDL2Q6WN34 429 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 PDZD4Q76G19 769 aaPredicted RBP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 CASKIN2Q8WXE0 1202 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 RSAD2Q8WXG1 361 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 PLD4Q96BZ4 506 aa23.49■■□□□ 1.35
SPHK1-210ENST00000592299 DNMT3BQ9UBC3 853 aaKnown RBP23.49■■□□□ 1.35
SPHK1-210ENST00000592299 STC2O76061 302 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 AUHQ13825 339 aaKnown RBP23.48■■□□□ 1.35
SPHK1-210ENST00000592299 MANEALQ5VSG8 457 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 FBXO38Q6PIJ6 1188 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 LRRC31Q6UY01 552 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 SYDE1Q6ZW31 735 aaPredicted RBP23.48■■□□□ 1.35
SPHK1-210ENST00000592299 BZW1Q7L1Q6 419 aaKnown RBP23.48■■□□□ 1.35
SPHK1-210ENST00000592299 DDX42Q86XP3 938 aaKnown RBP eCLIP23.48■■□□□ 1.35
SPHK1-210ENST00000592299 ALLCQ8N6M5 410 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 NETO2Q8NC67 525 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 ANKRD7Q92527 254 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 KLF16Q9BXK1 252 aaPredicted RBP23.48■■□□□ 1.35
SPHK1-210ENST00000592299 ZDHHC7Q9NXF8 308 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 ASIC3Q9UHC3 531 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 DENND4CQ5VZ89 1909 aa23.48■■□□□ 1.35
SPHK1-210ENST00000592299 CCDC195A0A1B0GUA6 201 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 IFNB1P01574 187 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 CKMP06732 381 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 RHOP08100 348 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 HTR7P34969 479 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 CARSP49589 748 aaKnown RBP23.47■■□□□ 1.35
SPHK1-210ENST00000592299 VPS41P49754 854 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 NRG1Q02297 640 aaPredicted RBP23.47■■□□□ 1.35
SPHK1-210ENST00000592299 MTA1Q13330 715 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 PAFAH1B3Q15102 231 aaKnown RBP23.47■■□□□ 1.35
SPHK1-210ENST00000592299 DUSP6Q16828 381 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 DUPD1Q68J44 220 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 CCNI2Q6ZMN8 369 aaPredicted RBP23.47■■□□□ 1.35
SPHK1-210ENST00000592299 PRUNE1Q86TP1 453 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 DENND1CQ8IV53 801 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 LRRN4Q8WUT4 740 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 CATSPERBQ9H7T0 1116 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 SNX24Q9Y343 169 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 PDE4DIPQ5VU43 2346 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 KRT14P02533 472 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 H2AFXP16104 143 aaPredicted RBP23.47■■□□□ 1.35
SPHK1-210ENST00000592299 CCR2P41597 374 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 SLC11A2P49281 568 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 SMAD3P84022 425 aaKnown RBP23.47■■□□□ 1.35
SPHK1-210ENST00000592299 BRD3Q15059 726 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 STXBP5Q5T5C0 1151 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 CHSY1Q86X52 802 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 GSPT2Q8IYD1 628 aaKnown RBP23.47■■□□□ 1.35
SPHK1-210ENST00000592299 TTC16Q8NEE8 873 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 PRKD2Q9BZL6 878 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 MPP6Q9NZW5 540 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 NEU3Q9UQ49 428 aa23.47■■□□□ 1.35
SPHK1-210ENST00000592299 GOLGA6L7A0A1B0GV03 622 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 CCDC151A5D8V7 595 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 NRG2O14511 850 aaPredicted RBP23.46■■□□□ 1.35
SPHK1-210ENST00000592299 FGF10O15520 208 aaPredicted RBP23.46■■□□□ 1.35
SPHK1-210ENST00000592299 ACSL4O60488 711 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 FGF19O95750 216 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 CORO1AP31146 461 aaKnown RBP23.46■■□□□ 1.35
SPHK1-210ENST00000592299 PTK6Q13882 451 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 HLTFQ14527 1009 aaKnown RBP eCLIP23.46■■□□□ 1.35
SPHK1-210ENST00000592299 CCDC89Q8N998 374 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 FAM71DQ8N9W8 422 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 MRPL38Q96DV4 380 aaKnown RBP23.46■■□□□ 1.35
SPHK1-210ENST00000592299 TCEAL4Q96EI5 215 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 IGFLR1Q9H665 355 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 CPQQ9Y646 472 aa23.46■■□□□ 1.35
SPHK1-210ENST00000592299 TRAV19A0A0A6YYK7 116 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 ERLIN1O75477 346 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 OLFM2O95897 454 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 MYBL2P10244 700 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 HOXC13P31276 330 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 SERPINB6P35237 376 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 EPHA5P54756 1037 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 GDF10P55107 478 aa23.45■■□□□ 1.34
SPHK1-210ENST00000592299 ACBD5Q5T8D3 534 aaPredicted RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms