RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 RNF43Q68DV7 783 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 SLC26A9Q7LBE3 791 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 LGI2Q8N0V4 545 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 CFAP52Q8N1V2 620 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 CARNMT1Q8N4J0 409 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 ATP6V0D2Q8N8Y2 350 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 EPS8L1Q8TE68 723 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 DDX1Q92499 740 aaKnown RBP15.75■□□□□ 0.11
ERCC1-213ENST00000592023 RNF34Q969K3 372 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 IRX2Q9BZI1 471 aaPredicted RBP15.75■□□□□ 0.11
ERCC1-213ENST00000592023 RXFP3Q9NSD7 469 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 LIMA1Q9UHB6 759 aaKnown RBP15.75■□□□□ 0.11
ERCC1-213ENST00000592023 CKAP5Q14008 2032 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 NUP205Q92621 2012 aa15.75■□□□□ 0.11
ERCC1-213ENST00000592023 ABCA7Q8IZY2 2146 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 SDK1Q7Z5N4 2213 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 IGHV1OR15-9A0A0B4J2B8 117 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 SYNCRIPO60506 623 aaKnown RBP15.74■□□□□ 0.11
ERCC1-213ENST00000592023 EPHX1P07099 455 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 TACR2P21452 398 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 SDHBP21912 280 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 PTGER3P43115 390 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 ATXN1P54253 815 aaKnown RBP15.74■□□□□ 0.11
ERCC1-213ENST00000592023 RPL6Q02878 288 aaKnown RBP15.74■□□□□ 0.11
ERCC1-213ENST00000592023 LMAN2Q12907 356 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 NME3Q13232 169 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 NCAPHQ15003 741 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 E2F5Q15329 346 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 ANO6Q4KMQ2 910 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 C2CD6Q53TS8 623 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 CAVIN1Q6NZI2 390 aaKnown RBP15.74■□□□□ 0.11
ERCC1-213ENST00000592023 ERMP1Q7Z2K6 904 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 ADIPOR2Q86V24 386 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 DEFB119Q8N690 84 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 ZNF366Q8N895 744 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 ZNF557Q8N988 423 aaPredicted RBP15.74■□□□□ 0.11
ERCC1-213ENST00000592023 SLC20A1Q8WUM9 679 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 BTN2A3PQ96KV6 586 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 SPAG5Q96R06 1193 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 MKRN2Q9H000 416 aaKnown RBP15.74■□□□□ 0.11
ERCC1-213ENST00000592023 SIK3Q9Y2K2 1263 aa15.74■□□□□ 0.11
ERCC1-213ENST00000592023 F5H5T6 163 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 TIMM44O43615 452 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 ZNF217O75362 1048 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 LUC7L3O95232 432 aaKnown RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 LSM8O95777 96 aaKnown RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 ZNF18P17022 549 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 CDK11BP21127 795 aaKnown RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 ABCB4P21439 1286 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 CCR1P32246 355 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 SOX5P35711 763 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 SULT1E1P49888 294 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 JAM2P57087 298 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 RNASE9P60153 205 aaKnown RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 NOMO3P69849 1222 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 EIF4EBP2Q13542 120 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 FAM102AQ5T9C2 384 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 OTUD1Q5VV17 481 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 NAA35Q5VZE5 725 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 LYSMD4Q5XG99 296 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 SLC36A4Q6YBV0 504 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 KIAA0907Q7Z7F0 614 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 ERICH1Q86X53 443 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 CIR1Q86X95 450 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 ZDHHC17Q8IUH5 632 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 CCDC117Q8IWD4 279 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 ZNF397Q8NF99 534 aaPredicted RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 NEK11Q8NG66 645 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 PIGKQ92643 395 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 RTKNQ9BST9 563 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 EDEM2Q9BV94 578 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 HSD3B7Q9H2F3 369 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 PRDM16Q9HAZ2 1276 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 NOCTQ9UK39 431 aaKnown RBP15.73■□□□□ 0.11
ERCC1-213ENST00000592023 FRYLO94915 3013 aa15.73■□□□□ 0.11
ERCC1-213ENST00000592023 DMXL1Q9Y485 3027 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 DCDC2BA2VCK2 349 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 KCNU1A8MYU2 1149 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 PATE3B3GLJ2 98 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 GOLGA8SH3BPF8 625 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 M0QYT0 321 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 SLC30A4O14863 429 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 AP5Z1O43299 807 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 DLDP09622 509 aaKnown RBP15.72■□□□□ 0.11
ERCC1-213ENST00000592023 SLC2A3P11169 496 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 ATP1A3P13637 1013 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 POLR2EP19388 210 aaKnown RBP15.72■□□□□ 0.11
ERCC1-213ENST00000592023 NOS2P35228 1153 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 GGCXP38435 758 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 COPAP53621 1224 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 UBXN1Q04323 297 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 PTPRNQ16849 979 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 FSCBQ5H9T9 825 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 MMS22LQ6ZRQ5 1243 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 XYLT1Q86Y38 959 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 MSANTD4Q8NCY6 345 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 FIBINQ8TAL6 211 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 CPA5Q8WXQ8 436 aa15.72■□□□□ 0.11
ERCC1-213ENST00000592023 C18orf8Q96DM3 657 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms