RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 PDCD2Q16342 344 aaPredicted RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 HSP90B2PQ58FF3 399 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 ZKSCAN2Q63HK3 967 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 SLC18B1Q6NT16 456 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 MIS18BP1Q6P0N0 1132 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 RPAINQ86UA6 219 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 CCDC117Q8IWD4 279 aaPredicted RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 LAS2Q8IYD9 372 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 HMGB4Q8WW32 186 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 MAP4K1Q92918 833 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 TRMT61AQ96FX7 289 aaKnown RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 LTV1Q96GA3 475 aaPredicted RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 SEMA4CQ9C0C4 833 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 VPS16Q9H269 839 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 PNNQ9H307 717 aaKnown RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 AGO4Q9HCK5 861 aaKnown RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 PRDM8Q9NQV8 689 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 ANAPC4Q9UJX5 808 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 RAB21Q9UL25 225 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 TRPC5Q9UL62 973 aaPredicted RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 DAPP1Q9UN19 280 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 ZBTB1Q9Y2K1 713 aa3.91□□□□□ -1.78
VMP1-212ENST00000591782 SIRT4Q9Y6E7 314 aaPredicted RBP3.91□□□□□ -1.78
VMP1-212ENST00000591782 SMIM35A0A1B0GVV1 85 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 hCG_1642624A0A1W2PR95 340 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 ZNF500O60304 480 aaPredicted RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 LARGE1O95461 756 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 HSP90AB1P08238 724 aaKnown RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 PRR35P0CG20 571 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 TACR3P29371 465 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 ZNF84P51523 738 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 POLE2P56282 527 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 RPL15P61313 204 aaKnown RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 RNASELQ05823 741 aaKnown RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 LMOD3Q0VAK6 560 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 FOXD4Q12950 439 aaPredicted RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 TIGD6Q17RP2 521 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 ZNF569Q5MCW4 686 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 MEX3CQ5U5Q3 659 aaKnown RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 KIAA1614Q5VZ46 1190 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 TANGO2Q6ICL3 276 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 JMJD6Q6NYC1 403 aaPredicted RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 WDR93Q6P2C0 686 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 NFRKBQ6P4R8 1299 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 RAB11FIP2Q7L804 512 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 NEK8Q86SG6 692 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 CREBRFQ8IUR6 639 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 OTUD7AQ8TE49 926 aaPredicted RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 ASB12Q8WXK4 309 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 CELF1Q92879 486 aaKnown RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 ZNF845Q96IR2 970 aaPredicted RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 GPR78Q96P69 363 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 FCRL5Q96RD9 977 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 GATA5Q9BWX5 397 aaPredicted RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 TM2D2Q9BX73 214 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 BRD8Q9H0E9 1235 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 ELAC1Q9H777 363 aaKnown RBP3.9□□□□□ -1.79
VMP1-212ENST00000591782 MLXIPLQ9NP71 852 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 SLC12A4Q9UP95 1085 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 B3GNT3Q9Y2A9 372 aa3.9□□□□□ -1.79
VMP1-212ENST00000591782 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 IPO5O00410 1097 aaKnown RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 IFRD1O00458 451 aaPredicted RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 DSCR3O14972 297 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 CREB3O43889 395 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 WDHD1O75717 1129 aaPredicted RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 ST6GAL1P15907 406 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 KELP23276 732 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 ATP5F1P24539 256 aaPredicted RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 GRK5P34947 590 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 PEX19P40855 299 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 ABCG1P45844 678 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 SLC37A1P57057 533 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 FOXL2P58012 376 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 TAS2R50P59544 299 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 RBM6P78332 1123 aaKnown RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 DMWDQ09019 674 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 DAZAP2Q15038 168 aaPredicted RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 RPS6KA2Q15349 733 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 EZH2Q15910 746 aaKnown RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 SRSF7Q16629 238 aaKnown RBP eCLIP3.89□□□□□ -1.79
VMP1-212ENST00000591782 FAM110CQ1W6H9 321 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 TTC22Q5TAA0 569 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 CTR9Q6PD62 1173 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 SLC2A7Q6PXP3 512 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 RRAGAQ7L523 313 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 ANKRD23Q86SG2 305 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 RFX6Q8HWS3 928 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 CNGA4Q8IV77 575 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 MNS1Q8NEH6 495 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 PIGKQ92643 395 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 P2RY11Q96G91 374 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 CFAP53Q96M91 514 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 FAM118BQ9BPY3 351 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 SENP7Q9BQF6 1050 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 TMEM120AQ9BXJ8 343 aa3.89□□□□□ -1.79
VMP1-212ENST00000591782 SEPSECSQ9HD40 501 aaKnown RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 SRP68Q9UHB9 627 aaKnown RBP3.89□□□□□ -1.79
VMP1-212ENST00000591782 LZTS1Q9Y250 596 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms