RNA–Protein interactions for RNA: ENST00000591075.1

NPC1-211, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-211ENST00000591075 RING1Q06587 406 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 TAF10Q12962 218 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 CCDC14Q49A88 953 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 ERMARDQ5T6L9 678 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 BZW1Q7L1Q6 419 aaKnown RBP9.2□□□□□ -0.94
NPC1-211ENST00000591075 BNIPLQ7Z465 357 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 RALGPS2Q86X27 583 aaPredicted RBP9.2□□□□□ -0.94
NPC1-211ENST00000591075 DEFB106AQ8N104 65 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 RASGEF1CQ8N431 466 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 CPA6Q8N4T0 437 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 ATRIPQ8WXE1 791 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 USP13Q92995 863 aaPredicted RBP9.2□□□□□ -0.94
NPC1-211ENST00000591075 NTAN1Q96AB6 310 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 RSPRY1Q96DX4 576 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 LMAN1LQ9HAT1 526 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.2□□□□□ -0.94
NPC1-211ENST00000591075 DUS2Q9NX74 493 aaKnown RBP9.2□□□□□ -0.94
NPC1-211ENST00000591075 USP18Q9UMW8 372 aa9.2□□□□□ -0.94
NPC1-211ENST00000591075 MTF2Q9Y483 593 aaPredicted RBP9.2□□□□□ -0.94
NPC1-211ENST00000591075 GOLGA6L10A0A0M3HER8 536 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 C2orf78A6NCI8 922 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 ZNF840PA6NDX5 716 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 YJEFN3A6XGL0 299 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 E7ENQ6 273 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 SPECC1L-ADORA2AF8WAN1 911 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 CCDC188H7C350 402 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 KCNK3O14649 394 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 SLC9A3R1O14745 358 aaPredicted RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 DDX3YO15523 660 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 LRCH4O75427 683 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 TJP3O95049 919 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 TRUB2O95900 331 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 FTCDO95954 541 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 ATP1A1P05023 1023 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 CCR1P32246 355 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 ATP5C1P36542 298 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 FLT3P36888 993 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 SSR1P43307 286 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 RPS9P46781 194 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 HCAR3P49019 387 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 TERF1P54274 439 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 CACNA2D1P54289 1103 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 MLLT6P55198 1093 aaPredicted RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 CSTF1Q05048 431 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 DEUP1Q05D60 604 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 SCAPQ12770 1279 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 GRSF1Q12849 480 aaKnown RBP eCLIP9.19□□□□□ -0.94
NPC1-211ENST00000591075 RUNX3Q13761 415 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 TFDP2Q14188 446 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 C2CD6Q53TS8 623 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 DGKKQ5KSL6 1271 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 HECTD3Q5T447 861 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 CCDC70Q6NSX1 233 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 RSRC2Q7L4I2 434 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 ZNF572Q7Z3I7 529 aaPredicted RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 TMEM150AQ86TG1 271 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 DDX42Q86XP3 938 aaKnown RBP eCLIP9.19□□□□□ -0.94
NPC1-211ENST00000591075 UNC45BQ8IWX7 931 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 JOSD2Q8TAC2 188 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 SCAMP5Q8TAC9 235 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 SH3RF2Q8TEC5 729 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 FAM172AQ8WUF8 416 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 ATP2A3Q93084 1043 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 NKD2Q969F2 451 aaPredicted RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 AZIN2Q96A70 460 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 C1orf74Q96LT6 269 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 HAPLN3Q96S86 360 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 CYP2S1Q96SQ9 504 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 DDX50Q9BQ39 737 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 EBF3Q9H4W6 596 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 WDCPQ9H6R7 721 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 GTSE1Q9NYZ3 720 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 TJP2Q9UDY2 1190 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 CCL26Q9Y258 94 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 TLR6Q9Y2C9 796 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 HBS1LQ9Y450 684 aaKnown RBP9.19□□□□□ -0.94
NPC1-211ENST00000591075 MRFAP1Q9Y605 127 aa9.19□□□□□ -0.94
NPC1-211ENST00000591075 CTAGE15A4D2H0 777 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 TMEM110-MUSTN1A8MSY1 372 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 M0QYT0 321 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 PGRMC1O00264 195 aaKnown RBP9.18□□□□□ -0.94
NPC1-211ENST00000591075 ENC1O14682 589 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 GFRA3O60609 400 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 NFATC1O95644 943 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 LATS1O95835 1130 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 CTAGE8P0CG41 777 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 RARGP13631 454 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 MIPP30301 263 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 CTHP32929 405 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 SOX9P48436 509 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 CXCR3P49682 368 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 SULT1E1P49888 294 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 CCR3P51677 355 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 NRLP54845 237 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 USP46P62068 366 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 LMNB2Q03252 620 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 TNK2Q07912 1038 aa9.18□□□□□ -0.94
NPC1-211ENST00000591075 EIF4EBP2Q13542 120 aaPredicted RBP9.18□□□□□ -0.94
NPC1-211ENST00000591075 PON2Q15165 354 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms