RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GRAMD4Q6IC98 578 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 PASD1Q8IV76 773 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 DHX40Q8IX18 779 aaKnown RBP11.67□□□□□ -0.54
SMAD4-211ENST00000590499 CAMKK1Q8N5S9 505 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 IL17RCQ8NAC3 791 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 KDF1Q8NAX2 398 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-211ENST00000590499 SLC39A13Q96H72 371 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 PPP1R13BQ96KQ4 1090 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 FCRL2Q96LA5 508 aaPredicted RBP11.67□□□□□ -0.54
SMAD4-211ENST00000590499 XPO6Q96QU8 1125 aaKnown RBP11.67□□□□□ -0.54
SMAD4-211ENST00000590499 ERGIC2Q96RQ1 377 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 PLK2Q9NYY3 685 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 MMP17Q9ULZ9 603 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 SLC8A2Q9UPR5 921 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 NAALADL1Q9UQQ1 740 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 STARD13Q9Y3M8 1113 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 DAAM1Q9Y4D1 1078 aa11.67□□□□□ -0.54
SMAD4-211ENST00000590499 PLXND1Q9Y4D7 1925 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 CDC14CA4D256 554 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 TBC1D3BA6NDS4 549 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 PRRT4C9JH25 899 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 ERBB2P04626 1255 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 TPM2P07951 284 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 NCAM1P13591 858 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 CNR2P34972 360 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 KRT9P35527 623 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 PXNP49023 591 aaPredicted RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 HARS2P49590 506 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 POLR2FP61218 127 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 SRSF5Q13243 272 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 SYCP1Q15431 976 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 TAF5Q15542 800 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 PREPLQ4J6C6 727 aaPredicted RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 FKBP15Q5T1M5 1219 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 NUGGCQ68CJ6 796 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 HEATR6Q6AI08 1181 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 LYPD4Q6UWN0 246 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 OLFML1Q6UWY5 402 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 TOGARAM2Q6ZUX3 1019 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 NOP9Q86U38 636 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 TAC4Q86UU9 113 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 CCDC33Q8N5R6 958 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 ALLCQ8N6M5 410 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 ANKRD20A12PQ8NF67 263 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 GOLGA1Q92805 767 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 BHMTQ93088 406 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 AZIN2Q96A70 460 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 FAM149B1Q96BN6 582 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 SLC2A13Q96QE2 648 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 HHIPQ96QV1 700 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 TRIM62Q9BVG3 475 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 NAT10Q9H0A0 1025 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 POPDC2Q9HBU9 364 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 FAM207AQ9NSI2 230 aaPredicted RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 ASNSD1Q9NWL6 643 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 EBF1Q9UH73 591 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 NOCTQ9UK39 431 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 CLEC4EQ9ULY5 219 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 SMG5Q9UPR3 1016 aaKnown RBP11.66□□□□□ -0.54
SMAD4-211ENST00000590499 TLR6Q9Y2C9 796 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 SLC27A6Q9Y2P4 619 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 DNAH14Q0VDD8 3507 aa11.66□□□□□ -0.54
SMAD4-211ENST00000590499 CKAP5Q14008 2032 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 MUC22E2RYF6 1773 aaPredicted RBP11.65□□□□□ -0.54
SMAD4-211ENST00000590499 SGK1O00141 431 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 KLF8O95600 359 aaPredicted RBP11.65□□□□□ -0.54
SMAD4-211ENST00000590499 APBB3O95704 486 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 GLI1P08151 1106 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 HOXD9P28356 352 aaPredicted RBP11.65□□□□□ -0.54
SMAD4-211ENST00000590499 DGKGP49619 791 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 TBX4P57082 545 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 ZNF445P59923 1031 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 YWHAZP63104 245 aaKnown RBP11.65□□□□□ -0.54
SMAD4-211ENST00000590499 PITX1P78337 314 aaPredicted RBP11.65□□□□□ -0.54
SMAD4-211ENST00000590499 IQCB1Q15051 598 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 CRY1Q16526 586 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 FAM133BQ5BKY9 247 aaKnown RBP11.65□□□□□ -0.54
SMAD4-211ENST00000590499 C10orf76Q5T2E6 689 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 ADGRF1Q5T601 910 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 NADSYN1Q6IA69 706 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 FAM183BPQ6ZVS7 135 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 RASSF3Q86WH2 238 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 TXNDC5Q8NBS9 432 aaKnown RBP11.65□□□□□ -0.54
SMAD4-211ENST00000590499 SERPINB11Q96P15 392 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 NOX5Q96PH1 765 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 ZDHHC4Q9NPG8 344 aa11.65□□□□□ -0.54
SMAD4-211ENST00000590499 RALGAPA1Q6GYQ0 2036 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 IRAK2O43187 625 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 ACSL4O60488 711 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 HSF2BPO75031 334 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 LSM8O95777 96 aaKnown RBP11.64□□□□□ -0.55
SMAD4-211ENST00000590499 TRUB2O95900 331 aaKnown RBP11.64□□□□□ -0.55
SMAD4-211ENST00000590499 CYBBP04839 570 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 CDK11BP21127 795 aaKnown RBP11.64□□□□□ -0.55
SMAD4-211ENST00000590499 SLC6A4P31645 630 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 SOX5P35711 763 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 GABRB2P47870 512 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 ZNF165P49910 485 aa11.64□□□□□ -0.55
SMAD4-211ENST00000590499 SGSHP51688 502 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms