RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 SCUBE3Q8IX30 993 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 FIBINQ8TAL6 211 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 ZNF606Q8WXB4 792 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 DNASE2BQ8WZ79 361 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 SHC3Q92529 594 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 FAM149B1Q96BN6 582 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 TOE1Q96GM8 510 aaKnown RBP7.89□□□□□ -1.15
NPC1-208ENST00000590301 SLC39A13Q96H72 371 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 POM121Q96HA1 1249 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 NOX5Q96PH1 765 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 MIS12Q9H081 205 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 TMEM245Q9H330 911 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 ST7Q9NRC1 585 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 DNAAF2Q9NVR5 837 aaKnown RBP7.89□□□□□ -1.15
NPC1-208ENST00000590301 ASNSD1Q9NWL6 643 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 SUN2Q9UH99 717 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 SLC12A6Q9UHW9 1150 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 DACH1Q9UI36 760 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 CLEC4EQ9ULY5 219 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 SCML1Q9UN30 329 aa7.89□□□□□ -1.15
NPC1-208ENST00000590301 HELZP42694 1942 aaKnown RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 GREB1Q4ZG55 1949 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 DENND4CQ5VZ89 1909 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 ATXN2Q99700 1313 aaKnown RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 A0A1B0GTW7 788 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 METTL12A8MUP2 240 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 E5RJQ4 531 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 PAPSS1O43252 624 aaPredicted RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 THAP12O43422 761 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 OPHN1O60890 802 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 TBL1XO60907 577 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 RNASEH1O60930 286 aaKnown RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 MOCS3O95396 460 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 FYNP06241 537 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 PRKCHP24723 683 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 ERCC5P28715 1186 aaPredicted RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 RDXP35241 583 aaKnown RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 MTIF2P46199 727 aaKnown RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 BPIFB4P59827 614 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 PTK2Q05397 1052 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 ZNF252P-AS1Q0IIN9 211 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 PDCLQ13371 301 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 SLC12A1Q13621 1099 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 CDH18Q13634 790 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 CAMK4Q16566 473 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 TPD52L1Q16890 204 aaPredicted RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 UAP1L1Q3KQV9 507 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 PLEKHG6Q3KR16 790 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 TTC31Q49AM3 519 aaPredicted RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 MS4A13Q5J8X5 152 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 EFHC1Q5JVL4 640 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 MBLAC2Q68D91 279 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 IL27RAQ6UWB1 636 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 PIP4P1Q86T03 277 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 RGL4Q8IZJ4 473 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 CLEC4CQ8WTT0 213 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 SORCS1Q8WY21 1168 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 TTC17Q96AE7 1141 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 BTN2A3PQ96KV6 586 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 FCRL2Q96LA5 508 aaPredicted RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 PPP1R9BQ96SB3 815 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 GTPBP2Q9BX10 602 aaKnown RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 GPR174Q9BXC1 333 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 SLC6A17Q9H1V8 727 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 LHX5Q9H2C1 402 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 CLSTN2Q9H4D0 955 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 OSGEPQ9NPF4 335 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.88□□□□□ -1.15
NPC1-208ENST00000590301 TJP2Q9UDY2 1190 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 TPX2Q9ULW0 747 aaKnown RBP7.88□□□□□ -1.15
NPC1-208ENST00000590301 PCDHGC3Q9UN70 934 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 CEP83Q9Y592 693 aa7.88□□□□□ -1.15
NPC1-208ENST00000590301 TPRP12270 2363 aaKnown RBP7.87□□□□□ -1.15
NPC1-208ENST00000590301 TARSL2A2RTX5 802 aaKnown RBP7.87□□□□□ -1.15
NPC1-208ENST00000590301 H0Y626 953 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 PIK3R2O00459 728 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 HSF2BPO75031 334 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 TRIM16O95361 564 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 TRUB2O95900 331 aaKnown RBP7.87□□□□□ -1.15
NPC1-208ENST00000590301 IGLV3-25P01717 112 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 DNTTP04053 509 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 SRPRAP08240 638 aaKnown RBP7.87□□□□□ -1.15
NPC1-208ENST00000590301 ZNF883P0CG24 379 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 ABCB4P21439 1286 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 PON1P27169 355 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 SLC6A4P31645 630 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 CCR1P32246 355 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 KRT9P35527 623 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 USP8P40818 1118 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 CDK17Q00537 523 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 MAN2A1Q16706 1144 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 ST3GAL2Q16842 350 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 PTPRNQ16849 979 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 HNRNPA1L2Q32P51 320 aaKnown RBP7.87□□□□□ -1.15
NPC1-208ENST00000590301 RABGAP1LQ5R372 815 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 ACBD5Q5T8D3 534 aaPredicted RBP7.87□□□□□ -1.15
NPC1-208ENST00000590301 ZNF776Q68DI1 518 aaPredicted RBP7.87□□□□□ -1.15
NPC1-208ENST00000590301 NADSYN1Q6IA69 706 aa7.87□□□□□ -1.15
NPC1-208ENST00000590301 RFWD3Q6PCD5 774 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms