RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 NSUN3Q9H649 340 aaKnown RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 WDCPQ9H6R7 721 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 FAM204AQ9H8W3 233 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ZWILCHQ9H900 591 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ALG13Q9NP73 1137 aaKnown RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 OSGEPQ9NPF4 335 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 METTL5Q9NRN9 209 aaKnown RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 TMLHEQ9NVH6 421 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 CYTH4Q9UIA0 394 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 CDC23Q9UJX2 597 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 TLR6Q9Y2C9 796 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 YIPF1Q9Y548 306 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 NME7Q9Y5B8 376 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 RAD54BQ9Y620 910 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 ZFP37Q9Y6Q3 630 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-210ENST00000590061 DUSP10Q9Y6W6 482 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 NLRC5Q86WI3 1866 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 TSC2P49815 1807 aa7.61□□□□□ -1.19
SMAD4-210ENST00000590061 MTCL1Q9Y4B5 1905 aaKnown RBP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 LCHNA4D1U4 455 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 USP27XA6NNY8 438 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 CCDC188H7C350 402 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 M0QYT0 321 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 PGRMC1O00264 195 aaKnown RBP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 KCNK3O14649 394 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 PAPLNO95428 1278 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 OR4Q2P0C623 313 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 ZDHHC11BP0C7U3 371 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 POU3F3P20264 500 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 MCM3P25205 808 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 PTPN7P35236 360 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 ARL4AP40617 200 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 HCAR3P49019 387 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 SLC11A2P49281 568 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 HARS2P49590 506 aaKnown RBP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 CLCN4P51793 760 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 ERVFC1P60507 584 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 RPL7AP62424 266 aaKnown RBP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 SCAPQ12770 1279 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 TWF1Q12792 350 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 TAF10Q12962 218 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 KRT81Q14533 505 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 DUSP6Q16828 381 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 ERMARDQ5T6L9 678 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 PLPP4Q5VZY2 271 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 FAM109BQ6ICB4 259 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 CES5AQ6NT32 575 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 LRRC31Q6UY01 552 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 TMEM184AQ6ZMB5 413 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 LRRC49Q8IUZ0 686 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 DEFB106AQ8N104 65 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 CNPY4Q8N129 248 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 ATP6V0D2Q8N8Y2 350 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 KCTD6Q8NC69 237 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 SLC7A14Q8TBB6 771 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 ACTRT1Q8TDG2 376 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 FAM172AQ8WUF8 416 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 ARNTL2Q8WYA1 636 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 E2F7Q96AV8 911 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 PLD4Q96BZ4 506 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 HAUS1Q96CS2 278 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 B3GALT6Q96L58 329 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 C1orf74Q96LT6 269 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 HAPLN3Q96S86 360 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 NPY6RQ99463 290 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 NKX2-4Q9H2Z4 354 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 SFXN1Q9H9B4 322 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 DDIT4Q9NX09 232 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 LSM7Q9UK45 103 aaKnown RBP7.6□□□□□ -1.19
SMAD4-210ENST00000590061 USP18Q9UMW8 372 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 SLC6A14Q9UN76 642 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 COG5Q9UP83 839 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 CAPN6Q9Y6Q1 641 aa7.6□□□□□ -1.19
SMAD4-210ENST00000590061 MYO7AQ13402 2215 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 TRAV19A0A0A6YYK7 116 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 TYW5A2RUC4 315 aaKnown RBP7.59□□□□□ -1.19
SMAD4-210ENST00000590061 CTAGE15A4D2H0 777 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 ZNF840PA6NDX5 716 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 YJEFN3A6XGL0 299 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 TMEM110-MUSTN1A8MSY1 372 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 E7ENQ6 273 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 H3BRJ5 948 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 SLC9A3R1O14745 358 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-210ENST00000590061 GRM6O15303 877 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 NCAM2O15394 837 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 FGF10O15520 208 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-210ENST00000590061 IRAK2O43187 625 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 TPD52L2O43399 206 aaKnown RBP7.59□□□□□ -1.19
SMAD4-210ENST00000590061 HCRTO43612 131 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 TLR5O60602 858 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 ADAM23O75077 832 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 CLASP2O75122 1294 aaKnown RBP7.59□□□□□ -1.19
SMAD4-210ENST00000590061 BEST1O76090 585 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 TRUB2O95900 331 aaKnown RBP7.59□□□□□ -1.19
SMAD4-210ENST00000590061 CALCAP01258 141 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 CTAGE8P0CG41 777 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 RARGP13631 454 aa7.59□□□□□ -1.19
SMAD4-210ENST00000590061 RPL17P18621 184 aaKnown RBP7.59□□□□□ -1.19
SMAD4-210ENST00000590061 IGFBP6P24592 240 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms