RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	LPAL2	Q16609	132 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	FSCB	Q5H9T9	825 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	EOGT	Q5NDL2	527 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	ANO7	Q6IWH7	933 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	ARC	Q7LC44	396 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	ANKS1B	Q7Z6G8	1248 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	C14orf80	Q86SX3	495 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	ZNF683	Q8IZ20	524 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	EMC1	Q8N766	993 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	GAB3	Q8WWW8	586 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	METTL5	Q9NRN9	209 aa	Known RBP	17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	TMPRSS4	Q9NRS4	437 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	ABCB8	Q9NUT2	735 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	ELOVL2	Q9NXB9	296 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	ARHGEF38	Q9NXL2	777 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	AIPL1	Q9NZN9	384 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	STIM2	Q9P246	746 aa		17.93	■□□□□ 0.46
MBD1-221	ENST00000589867	DCLK1	O15075	740 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	APOE	P02649	317 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	TGM1	P22735	817 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	CCR1	P32246	355 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	GGCX	P38435	758 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	IL12RB1	P42701	662 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	SULT1E1	P49888	294 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	UBASH3A	P57075	661 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	LMAN2	Q12907	356 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	SLC25A52	Q3SY17	297 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	FIGN	Q5HY92	759 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	ZNF571	Q7Z3V5	609 aa	Predicted RBP	17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	DNAAF5	Q86Y56	855 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	LGI2	Q8N0V4	545 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	HJURP	Q8NCD3	748 aa	Predicted RBP	17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	FIBIN	Q8TAL6	211 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	IGSF8	Q969P0	613 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	ERLEC1	Q96DZ1	483 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	CFAP57	Q96MR6	1250 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	TPSD1	Q9BZJ3	242 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	SNX10	Q9Y5X0	201 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	RAD54B	Q9Y620	910 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	HS3ST4	Q9Y661	456 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	STON1	Q9Y6Q2	735 aa		17.92	■□□□□ 0.46
MBD1-221	ENST00000589867	DOCK4	Q8N1I0	1966 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	C2CD4B	A6NLJ0	364 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	PAGE1	O75459	146 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	ENDOD1	O94919	500 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	PABPC1	P11940	636 aa	Known RBP	17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	HOXB2	P14652	356 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	GABRG2	P18507	467 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	GBP1	P32455	592 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	PRKCI	P41743	596 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	SIM2	Q14190	667 aa	Predicted RBP	17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	ZNF234	Q14588	700 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	PTPRN	Q16849	979 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	FUT11	Q495W5	492 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	CCDC14	Q49A88	953 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	SH3PXD2A	Q5TCZ1	1133 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	FBXL22	Q6P050	247 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	LRSAM1	Q6UWE0	723 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	NUDT18	Q6ZVK8	323 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	CHST9	Q7L1S5	443 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	KBTBD6	Q86V97	674 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	CHSY1	Q86X52	802 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	CIR1	Q86X95	450 aa	Predicted RBP	17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	CHPF	Q8IZ52	775 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	FRMD1	Q8N878	549 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	ATP6V0D2	Q8N8Y2	350 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	DDX50	Q9BQ39	737 aa	Known RBP	17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	EDEM3	Q9BZQ6	932 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	RRN3	Q9NYV6	651 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	ADAM22	Q9P0K1	906 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	IFNK	Q9P0W0	207 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	GGA2	Q9UJY4	613 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	INVS	Q9Y283	1065 aa		17.91	■□□□□ 0.46
MBD1-221	ENST00000589867	DCHS1	Q96JQ0	3298 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	TCRBV21S2A2	A0A5A6	115 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	DDX3X	O00571	662 aa	Known RBP eCLIP	17.9	■□□□□ 0.46	2e-8	■■■■□ 25.7
MBD1-221	ENST00000589867	RPP40	O75818	363 aa	Known RBP	17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	SLC2A3	P11169	496 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	PRKCH	P24723	683 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	AUH	Q13825	339 aa	Known RBP	17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	EIF4H	Q15056	248 aa	Known RBP	17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	C5orf22	Q49AR2	442 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	HGSNAT	Q68CP4	663 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	TRMT11	Q7Z4G4	463 aa	Known RBP	17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	FAM160A2	Q8N612	972 aa	Predicted RBP	17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	OR52K2	Q8NGK3	314 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	WFIKKN2	Q8TEU8	576 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	CYB5D2	Q8WUJ1	264 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	RXFP2	Q8WXD0	754 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	MYO19	Q96H55	970 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	SLC6A17	Q9H1V8	727 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	HAUS4	Q9H6D7	363 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	PARD6A	Q9NPB6	346 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	THADA	Q6YHU6	1953 aa		17.9	■□□□□ 0.46
MBD1-221	ENST00000589867	RALGAPA1	Q6GYQ0	2036 aa		17.89	■□□□□ 0.46
MBD1-221	ENST00000589867	GOLGA6L19	H0YKK7	550 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	LUC7L3	O95232	432 aa	Known RBP	17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	BCKDHB	P21953	392 aa		17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	RFC1	P35251	1148 aa	Predicted RBP	17.89	■□□□□ 0.45
MBD1-221	ENST00000589867	NSF	P46459	744 aa	Known RBP	17.89	■□□□□ 0.45

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms