RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 DQX1Q8TE96 717 aaKnown RBP10.79□□□□□ -0.68
SDF2-208ENST00000589788 DDI1Q8WTU0 396 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 SERPINB11Q96P15 392 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 ZSCAN32Q9NX65 697 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 MARK1Q9P0L2 795 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 PCDHGA2Q9Y5H1 932 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 R4GN57 208 aa10.79□□□□□ -0.68
SDF2-208ENST00000589788 CHURC1-FNTBB4DL54 471 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 K7EQS6 105 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 CDK2AP1O14519 115 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 TEX33O43247 280 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 PAPSS2O95340 614 aaPredicted RBP10.78□□□□□ -0.68
SDF2-208ENST00000589788 LATS1O95835 1130 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 ERBB2P04626 1255 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 MMEP08473 750 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 CDH5P33151 784 aaPredicted RBP10.78□□□□□ -0.68
SDF2-208ENST00000589788 TNFRSF4P43489 277 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 DGKGP49619 791 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 PSMA6P60900 246 aaKnown RBP10.78□□□□□ -0.68
SDF2-208ENST00000589788 CDR2Q01850 454 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 SLC6A3Q01959 620 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 RING1Q06587 406 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 NAA30Q147X3 362 aaPredicted RBP10.78□□□□□ -0.68
SDF2-208ENST00000589788 PTPN20Q4JDL3 420 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 DCAF6Q58WW2 860 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 ADGRF1Q5T601 910 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 SYPL2Q5VXT5 272 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 NAA35Q5VZE5 725 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 PKN3Q6P5Z2 889 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 SARM1Q6SZW1 724 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 FAM183BPQ6ZVS7 135 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 ZDHHC17Q8IUH5 632 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 TERB1Q8NA31 727 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 USP33Q8TEY7 942 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 ZDHHC1Q8WTX9 485 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 SLC20A1Q8WUM9 679 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 DDX1Q92499 740 aaKnown RBP10.78□□□□□ -0.68
SDF2-208ENST00000589788 EZH1Q92800 747 aaPredicted RBP10.78□□□□□ -0.68
SDF2-208ENST00000589788 NKD2Q969F2 451 aaPredicted RBP10.78□□□□□ -0.68
SDF2-208ENST00000589788 SEMA4AQ9H3S1 761 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 ASNSD1Q9NWL6 643 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 PLK2Q9NYY3 685 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 TLR6Q9Y2C9 796 aa10.78□□□□□ -0.68
SDF2-208ENST00000589788 FANCMQ8IYD8 2048 aa10.77□□□□□ -0.68
SDF2-208ENST00000589788 A0A0A0MRY4 1105 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 FAM170AA1A519 330 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 PROB1E7EW31 1015 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 GRAP2O75791 330 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 TRUB2O95900 331 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 IGLV3-27P01718 113 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 APOEP02649 317 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 CCDC172P0C7W6 258 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 GBP1P32455 592 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 MRPS21P82921 87 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 CDK17Q00537 523 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 CENPCQ03188 943 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 MESP2Q0VG99 397 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 TAF5Q15542 800 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 MPPE1Q53F39 396 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 C10orf76Q5T2E6 689 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 HEATR6Q6AI08 1181 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 OLFML1Q6UWY5 402 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 TRIM72Q6ZMU5 477 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 SYT13Q7L8C5 426 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 SLC26A9Q7LBE3 791 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 TAC4Q86UU9 113 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 ALYREFQ86V81 257 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 SFTPA1Q8IWL2 248 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 FAM217AQ8IXS0 508 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 DEFB106AQ8N104 65 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 CPA5Q8WXQ8 436 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 C18orf8Q96DM3 657 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 PIWIL1Q96J94 861 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 DDX50Q9BQ39 737 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 SAP130Q9H0E3 1048 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 FAM204AQ9H8W3 233 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 SEPT11Q9NVA2 429 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 C2orf42Q9NWW7 574 aa10.77□□□□□ -0.69
SDF2-208ENST00000589788 NOCTQ9UK39 431 aaKnown RBP10.77□□□□□ -0.69
SDF2-208ENST00000589788 SYNJ2BP-COX16A0A087WUM0 186 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 A0A1B0GTH6 734 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 A0A1W2PQC6 194 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 TYW5A2RUC4 315 aaKnown RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 K7ESF4 209 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 MEN1O00255 615 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 IRAK2O43187 625 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 ACSL4O60488 711 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 TSPAN3O60637 253 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 DAB1O75553 588 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 KLF8O95600 359 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 MOCS2O96007 188 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 PENKP01210 267 aaPredicted RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 SLC2A3P11169 496 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 TDGF1P13385 188 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 FERP16591 822 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 FNTBP49356 437 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 RNASE9P60153 205 aaKnown RBP10.76□□□□□ -0.69
SDF2-208ENST00000589788 NOMO3P69849 1222 aa10.76□□□□□ -0.69
SDF2-208ENST00000589788 FANCCQ00597 558 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms