RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 RPS24P62847 133 aaKnown RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 PRKCQQ04759 706 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 TRIM67Q6ZTA4 783 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 ETFBKMTQ8IXQ9 262 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 CFAP52Q8N1V2 620 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 HJURPQ8NCD3 748 aaPredicted RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 TMA16Q96EY4 203 aaKnown RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 MSANTD3Q96H12 275 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 GPATCH2LQ9NWQ4 482 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 LCMT1Q9UIC8 334 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 USP18Q9UMW8 372 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 BTNL10A8MVZ5 291 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 BUB1O43683 1085 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 CACNG3O60359 315 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 IL1R2P27930 398 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 MAN1A1P33908 653 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 ARHGAP25P42331 645 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 SLC6A11P48066 632 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 IRAK1P51617 712 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 AIF1P55008 147 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 EFHC2Q5JST6 749 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 ARTNQ5T4W7 220 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 CIR1Q86X95 450 aaPredicted RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 ZNF683Q8IZ20 524 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 PYROXD2Q8N2H3 581 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 IGSF8Q969P0 613 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 RPRD1AQ96P16 312 aaPredicted RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 NCAPGQ9BPX3 1015 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 SNRNP25Q9BV90 132 aaKnown RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 IRX2Q9BZI1 471 aaPredicted RBP19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 OSBPL2Q9H1P3 480 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 STIM2Q9P246 746 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 CLEC4EQ9ULY5 219 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 CUL9Q8IWT3 2517 aa19.61■□□□□ 0.73
CLPTM1-209ENST00000588855 E9PAM4 449 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 FAM72CH0Y354 149 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 BUB1BO60566 1050 aaPredicted RBP19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 SSR1P43307 286 aaKnown RBP19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 STARD6P59095 220 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 AMPD2Q01433 879 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 SLC25A11Q02978 314 aaKnown RBP19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 MESP2Q0VG99 397 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 KIF5AQ12840 1032 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 PON2Q15165 354 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 SMTNL2Q2TAL5 461 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 RABGAP1LQ5R372 815 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 FAM72AQ5TYM5 149 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 TXNRD3NBQ6F5E7 133 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 FAM72DQ6L9T8 149 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 FAM72BQ86X60 149 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 TXLNBQ8N3L3 684 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 FAM3CQ92520 227 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 C1orf74Q96LT6 269 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 GOLPH3Q9H4A6 298 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 EPHX3Q9H6B9 360 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 ZWILCHQ9H900 591 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 DNAJC17Q9NVM6 304 aaKnown RBP19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 OR12D3Q9UGF7 316 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 AP4E1Q9UPM8 1137 aa19.6■□□□□ 0.73
CLPTM1-209ENST00000588855 TYW5A2RUC4 315 aaKnown RBP19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 TRIM24O15164 1050 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 TULP3O75386 442 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 PDGFBP01127 241 aaPredicted RBP19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 CCDC175P0C221 793 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 KDSRQ06136 332 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 CA9Q16790 459 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 KCNT1Q5JUK3 1230 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 MPP7Q5T2T1 576 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 ERMARDQ5T6L9 678 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 ACBD5Q5T8D3 534 aaPredicted RBP19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 RNF43Q68DV7 783 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 CD101Q93033 1021 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 SHDQ96IW2 340 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 XPO6Q96QU8 1125 aaKnown RBP19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 TBC1D17Q9HA65 648 aa19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 FBRSL1Q9HCM7 1045 aaKnown RBP19.59■□□□□ 0.73
CLPTM1-209ENST00000588855 TMEM221A6NGB7 291 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 M0R296 226 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 MAN2B1O00754 1011 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 SRGAP2O75044 1071 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 EIF2DP41214 584 aaKnown RBP19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 GALK1P51570 392 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 TAS2R40P59535 323 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 NRG1Q02297 640 aaPredicted RBP19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 C5orf22Q49AR2 442 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 MANEALQ5VSG8 457 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 C1orf228Q6PIY5 440 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 ZNF852Q6ZMS4 543 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 PHTF2Q8N3S3 785 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 TPCN2Q8NHX9 752 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 WFDC5Q8TCV5 224 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 P2RY13Q9BPV8 354 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 FOXQ1Q9C009 403 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 DHX35Q9H5Z1 703 aaKnown RBP19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 NDRG2Q9UN36 371 aaKnown RBP19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 HYOU1Q9Y4L1 999 aa19.58■□□□□ 0.73
CLPTM1-209ENST00000588855 IGLV3-10A0A075B6K4 115 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 MACROD2A1Z1Q3 448 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 CNTN5O94779 1100 aa19.57■□□□□ 0.72
CLPTM1-209ENST00000588855 LRIG2O94898 1065 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms