RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 HMBSP08397 361 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 SLC11A2P49281 568 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 SLC7A9P82251 487 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 SLC7A5Q01650 507 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 KCNC3Q14003 757 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 C1orf228Q6PIY5 440 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 CCHCR1Q8TD31 782 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 EPC1Q9H2F5 836 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 RETREG1Q9H6L5 497 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 DNMT3BQ9UBC3 853 aaKnown RBP32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 SAE1Q9UBE0 346 aaPredicted RBP32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 HEY1Q9Y5J3 304 aa32.02■■■□□ 2.72
CAPNS1-206ENST00000588815 TRAV19A0A0A6YYK7 116 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 BHMG1C9JSJ3 638 aaPredicted RBP32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 E9PAM4 449 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 STC2O76061 302 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 RBP3P10745 1247 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 TNFRSF8P28908 595 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 ARHGAP15Q53QZ3 475 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 TXNDC8Q6A555 127 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 LZTR1Q8N653 840 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 EIF1ADQ8N9N8 165 aaKnown RBP32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 SEC14L1Q92503 715 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 ERP44Q9BS26 406 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 XPO7Q9UIA9 1087 aaKnown RBP32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 TRANK1O15050 2925 aa32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 NUP210Q8TEM1 1887 aaPredicted RBP32.01■■■□□ 2.71
CAPNS1-206ENST00000588815 IGLV3-10A0A075B6K4 115 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 A0A1W2PRU2 124 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 CFAP69A5D8W1 941 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 ZNF197O14709 1029 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 NCAM2O15394 837 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 ACSL4O60488 711 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 RHOP08100 348 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 STIP1P31948 543 aaKnown RBP32■■■□□ 2.71
CAPNS1-206ENST00000588815 KCNQ1P51787 676 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 DRG2P55039 364 aaKnown RBP32■■■□□ 2.71
CAPNS1-206ENST00000588815 PPP1R7Q15435 360 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 CHRDL2Q6WN34 429 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 ALLCQ8N6M5 410 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 PNKPQ96T60 521 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 FAM118BQ9BPY3 351 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 SFXN1Q9H9B4 322 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 GDF3Q9NR23 364 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 NEU3Q9UQ49 428 aa32■■■□□ 2.71
CAPNS1-206ENST00000588815 TNRC18O15417 2968 aaPredicted RBP32■■■□□ 2.71
CAPNS1-206ENST00000588815 SHROOM3Q8TF72 1996 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 CCDC195A0A1B0GUA6 201 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 WASH4PA8MWX3 477 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 HACD1B0YJ81 288 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 SRGAP2BP0DMP2 458 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 CYP4F8P98187 520 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 GUCY2DQ02846 1103 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 AUHQ13825 339 aaKnown RBP31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 NPNTQ6UXI9 565 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 ARL14EPQ8N8R7 260 aaPredicted RBP31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 PRMT1Q99873 361 aaKnown RBP31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 DDX50Q9BQ39 737 aaKnown RBP31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 NSUN3Q9H649 340 aaKnown RBP31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 ETNK2Q9NVF9 386 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 HCFC1R1Q9NWW0 138 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 DTLQ9NZJ0 730 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 SNX10Q9Y5X0 201 aa31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 RANBP2P49792 3224 aaKnown RBP31.99■■■□□ 2.71
CAPNS1-206ENST00000588815 PTK6Q13882 451 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 ZNF683Q8IZ20 524 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 MAB21L3Q8N8X9 362 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 CCDC89Q8N998 374 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 ZNF707Q96C28 371 aaPredicted RBP31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 ZFRQ96KR1 1074 aaKnown RBP31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 OLFM3Q96PB7 478 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 EPB41L5Q9HCM4 733 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 ARGLU1Q9NWB6 273 aaPredicted RBP31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 LMCD1Q9NZU5 365 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 CHD5Q8TDI0 1954 aa31.98■■■□□ 2.71
CAPNS1-206ENST00000588815 BCLAF3A2AJT9 711 aaKnown RBP31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 MRPS25P82663 173 aaKnown RBP31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 GBE1Q04446 702 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 CUL1Q13616 776 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 BRD3Q15059 726 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 PDK1Q15118 436 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 LRIT3Q3SXY7 679 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 RWDD4Q6NW29 188 aaKnown RBP31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 TMEM184AQ6ZMB5 413 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 GSTA5Q7RTV2 222 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 CDKL3Q8IVW4 592 aaPredicted RBP31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 SHKBP1Q8TBC3 707 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 ZYG11BQ9C0D3 744 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 BRD8Q9H0E9 1235 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 FAM114A2Q9NRY5 505 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 CCDC151A5D8V7 595 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 H7C0C1 242 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 CKMP06732 381 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 GGCXP38435 758 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 ATP5OP48047 213 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 C5orf22Q49AR2 442 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 ARTNQ5T4W7 220 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 DUPD1Q68J44 220 aa31.97■■■□□ 2.71
CAPNS1-206ENST00000588815 CHSY1Q86X52 802 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms