RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 METTL14Q9HCE5 456 aaKnown RBP14.25□□□□□ -0.13
HDAC5-208ENST00000588419 PRSS16Q9NQE7 514 aa14.25□□□□□ -0.13
HDAC5-208ENST00000588419 HOOK1Q9UJC3 728 aaKnown RBP14.25□□□□□ -0.13
HDAC5-208ENST00000588419 PCOLCE2Q9UKZ9 415 aa14.25□□□□□ -0.13
HDAC5-208ENST00000588419 LHX6Q9UPM6 363 aa14.25□□□□□ -0.13
HDAC5-208ENST00000588419 CTNND2Q9UQB3 1225 aa14.25□□□□□ -0.13
HDAC5-208ENST00000588419 NFE2L3Q9Y4A8 694 aa14.25□□□□□ -0.13
HDAC5-208ENST00000588419 CEP83Q9Y592 693 aa14.25□□□□□ -0.13
HDAC5-208ENST00000588419 FAM208BQ5VWN6 2430 aa14.25□□□□□ -0.13
HDAC5-208ENST00000588419 RNF225M0QZC1 329 aaPredicted RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 KCNK3O14649 394 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 ACSL4O60488 711 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 IGLV3-19P01714 112 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 PAEPP09466 180 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 DLDP09622 509 aaKnown RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 KRT5P13647 590 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 AFF3P51826 1226 aaKnown RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 SCAPQ12770 1279 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 CETN1Q12798 172 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 CDH18Q13634 790 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 PKDCCQ504Y2 493 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 COBLL1Q53SF7 1204 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 FAM133BQ5BKY9 247 aaKnown RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 PIK3R6Q5UE93 754 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 MSANTD2Q6P1R3 559 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 ARHGEF19Q8IW93 802 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 CCDC117Q8IWD4 279 aaPredicted RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 UNC45BQ8IWX7 931 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 DHX40Q8IX18 779 aaKnown RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 HJURPQ8NCD3 748 aaPredicted RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 RHBDD1Q8TEB9 315 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 ADAMTS14Q8WXS8 1223 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 BIRC7Q96CA5 298 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 PRICKLE1Q96MT3 831 aaPredicted RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 ZSWIM1Q9BR11 485 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 TM9SF3Q9HD45 589 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 STOML2Q9UJZ1 356 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 KIAA1257Q9ULG3 409 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.24□□□□□ -0.13
HDAC5-208ENST00000588419 SNX11Q9Y5W9 270 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 DOCK9Q9BZ29 2069 aa14.24□□□□□ -0.13
HDAC5-208ENST00000588419 GABBR2O75899 941 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 CD44P16070 742 aaKnown RBP14.23□□□□□ -0.13
HDAC5-208ENST00000588419 RPS24P62847 133 aaKnown RBP14.23□□□□□ -0.13
HDAC5-208ENST00000588419 RING1Q06587 406 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 KIF19Q2TAC6 998 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 NADSYN1Q6IA69 706 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 MMS22LQ6ZRQ5 1243 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 SLCO6A1Q86UG4 719 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 CFAP52Q8N1V2 620 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.23□□□□□ -0.13
HDAC5-208ENST00000588419 SLC35F5Q8WV83 523 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 NELFBQ8WX92 580 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 IRGQQ8WZA9 623 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 MYEOVQ96EZ4 313 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 CEP63Q96MT8 703 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 SERPINB11Q96P15 392 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 DDX50Q9BQ39 737 aaKnown RBP14.23□□□□□ -0.13
HDAC5-208ENST00000588419 NUCKS1Q9H1E3 243 aaKnown RBP14.23□□□□□ -0.13
HDAC5-208ENST00000588419 FBRSQ9HAH7 460 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 SUN2Q9UH99 717 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 MAN1B1Q9UKM7 699 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 NCKAP1Q9Y2A7 1128 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 BTBD3Q9Y2F9 522 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 CABIN1Q9Y6J0 2220 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 KNL1Q8NG31 2342 aa14.23□□□□□ -0.13
HDAC5-208ENST00000588419 SPEGQ15772 3267 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 A0A1W2PP55 124 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 BIN1O00499 593 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 CAPN9O14815 690 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 FLRT2O43155 660 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 IRAK2O43187 625 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 CBFA2T3O75081 653 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 SIN3BO75182 1162 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 FBXO21O94952 628 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 IGLV3-27P01718 113 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
HDAC5-208ENST00000588419 CSKP41240 450 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 STX17P56962 302 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 STILQ15468 1287 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 CNGA2Q16280 664 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 C19orf48Q6RUI8 117 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 TAC4Q86UU9 113 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 CHSY1Q86X52 802 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 SCML4Q8N228 414 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 ENGASEQ8NFI3 743 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 MDM1Q8TC05 714 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 DQX1Q8TE96 717 aaKnown RBP14.22□□□□□ -0.13
HDAC5-208ENST00000588419 DHTKD1Q96HY7 919 aaPredicted RBP14.22□□□□□ -0.13
HDAC5-208ENST00000588419 FCRL2Q96LA5 508 aaPredicted RBP14.22□□□□□ -0.13
HDAC5-208ENST00000588419 PCED1AQ9H1Q7 454 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 NAALADL1Q9UQQ1 740 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 ANKRD6Q9Y2G4 727 aa14.22□□□□□ -0.13
HDAC5-208ENST00000588419 GOLGA4Q13439 2230 aaKnown RBP14.22□□□□□ -0.13
HDAC5-208ENST00000588419 SYNJ2BP-COX16A0A087WUM0 186 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 MID1O15344 667 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 RNASEH1O60930 286 aaKnown RBP14.21□□□□□ -0.13
HDAC5-208ENST00000588419 APOEP02649 317 aa14.21□□□□□ -0.13
HDAC5-208ENST00000588419 ATXN1LP0C7T5 689 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms