RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 CD27P26842 260 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 TTC31Q49AM3 519 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-213ENST00000587604 PKDCCQ504Y2 493 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 PIK3R6Q5UE93 754 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 TCERG1LQ5VWI1 586 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 MSANTD2Q6P1R3 559 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 UNC45BQ8IWX7 931 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 ZC3H3Q8IXZ2 948 aaKnown RBP14.63□□□□□ -0.07
DNMT1-213ENST00000587604 SMYD4Q8IYR2 804 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-213ENST00000587604 GALNT15Q8N3T1 639 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 ZNF557Q8N988 423 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-213ENST00000587604 IGSF8Q969P0 613 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 DKK4Q9UBT3 224 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.63□□□□□ -0.07
DNMT1-213ENST00000587604 ZDHHC9Q9Y397 364 aa14.63□□□□□ -0.07
DNMT1-213ENST00000587604 LOC400499M0QZD8 3231 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 O00370 1275 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 SLC16A3O15427 465 aaKnown RBP14.62□□□□□ -0.07
DNMT1-213ENST00000587604 IRAK2O43187 625 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 FSBPO95073 299 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 IGLV3-27P01718 113 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 LCP1P13796 627 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 TBXAS1P24557 533 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-213ENST00000587604 CD70P32970 193 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 GRK6P43250 576 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 SLC11A2P49281 568 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 SGSHP51688 502 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 DAOAP59103 153 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 FKBP3Q00688 224 aaKnown RBP14.62□□□□□ -0.07
DNMT1-213ENST00000587604 COL28A1Q2UY09 1125 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 DCAF17Q5H9S7 520 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-213ENST00000587604 NUGGCQ68CJ6 796 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 ZNF776Q68DI1 518 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-213ENST00000587604 LCLAT1Q6UWP7 414 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 PDZD3Q86UT5 571 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 ENGASEQ8NFI3 743 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 WFDC5Q8TCV5 224 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 SLC35F5Q8WV83 523 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 IRGQQ8WZA9 623 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 AZIN2Q96A70 460 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 TTC17Q96AE7 1141 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 ORAI3Q9BRQ5 295 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 SCAND2PQ9GZW5 306 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-213ENST00000587604 RSPH9Q9H1X1 276 aaPredicted RBP14.62□□□□□ -0.07
DNMT1-213ENST00000587604 GOLPH3LQ9H4A5 285 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 SCML1Q9UN30 329 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 NCKAP1Q9Y2A7 1128 aa14.62□□□□□ -0.07
DNMT1-213ENST00000587604 GOLGA6L7A0A1B0GV03 622 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 GOLGA8CPA6NN73 597 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 KCNK3O14649 394 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 DFNA5O60443 496 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 ACSL4O60488 711 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 TBL1XO60907 577 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 GABBR2O75899 941 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 PRCPP42785 496 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 CTSKP43235 329 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 CCT8P50990 548 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 FAM133BQ5BKY9 247 aaKnown RBP14.61□□□□□ -0.07
DNMT1-213ENST00000587604 RFWD3Q6PCD5 774 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 USP30Q70CQ3 517 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 UBR7Q8N806 425 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 FIBINQ8TAL6 211 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 LMLNQ96KR4 655 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 TSG101Q99816 390 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 SCUBE2Q9NQ36 999 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 RAXQ9Y2V3 346 aa14.61□□□□□ -0.07
DNMT1-213ENST00000587604 TP53BP1Q12888 1972 aaPredicted RBP14.61□□□□□ -0.07
DNMT1-213ENST00000587604 TRABD2BA6NFA1 517 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 H0Y8X5 98 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 VILLO15195 856 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 PAPSS1O43252 624 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 IGHV4-34P06331 123 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 PAEPP09466 180 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 SLC6A4P31645 630 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 TBX4P57082 545 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 ST8SIA6P61647 398 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 RACK1P63244 317 aaKnown RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 SFSWAPQ12872 951 aaKnown RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 LRMPQ12912 555 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 CAMK2BQ13554 666 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 SMAD1Q15797 465 aaKnown RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 CNGA2Q16280 664 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 SOWAHCQ53LP3 525 aaPredicted RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 COBLL1Q53SF7 1204 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 KCNT1Q5JUK3 1230 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 KIAA0895LQ68EN5 471 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 ANKRD40Q6AI12 368 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 PMF1Q6P1K2 205 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 LAYNQ6UX15 382 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 ADAT2Q7Z6V5 191 aaKnown RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 MFN1Q8IWA4 741 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 GANCQ8TET4 914 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 HNRNPLLQ8WVV9 542 aaKnown RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 TFAP2BQ92481 460 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 SLC35C1Q96A29 364 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 MYO19Q96H55 970 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 HSFY1Q96LI6 401 aa14.6□□□□□ -0.07
DNMT1-213ENST00000587604 DDX50Q9BQ39 737 aaKnown RBP14.6□□□□□ -0.07
DNMT1-213ENST00000587604 PABPC3Q9H361 631 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms