RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 USP34Q70CQ2 3546 aa15.35■□□□□ 0.05
ATG4D-207ENST00000587256 NPC1O15118 1278 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 CALB1P05937 261 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 UNGP13051 313 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-207ENST00000587256 UBASH3AP57075 661 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 MTA1Q13330 715 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 EIF4EBP2Q13542 120 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-207ENST00000587256 USP39Q53GS9 565 aaKnown RBP15.34■□□□□ 0.05
ATG4D-207ENST00000587256 RABGAP1LQ5R372 815 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 PHLDB2Q86SQ0 1253 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 CFAP52Q8N1V2 620 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 EMC1Q8N766 993 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
ATG4D-207ENST00000587256 WFDC5Q8TCV5 224 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 SORCS1Q8WY21 1168 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 MYEOVQ96EZ4 313 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 SPACA7Q96KW9 195 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 GABRG3Q99928 467 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 TSPY26PQ9H489 355 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 PIGVQ9NUD9 493 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 ADAM22Q9P0K1 906 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 RAD54BQ9Y620 910 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 STON1Q9Y6Q2 735 aa15.34■□□□□ 0.05
ATG4D-207ENST00000587256 H0Y626 953 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 LUC7L3O95232 432 aaKnown RBP15.33■□□□□ 0.04
ATG4D-207ENST00000587256 TFE3P19532 575 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-207ENST00000587256 CD70P32970 193 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 GGCXP38435 758 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 ZNF234Q14588 700 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 NR1I3Q14994 352 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 SLC25A52Q3SY17 297 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 FNDC3BQ53EP0 1204 aaKnown RBP15.33■□□□□ 0.04
ATG4D-207ENST00000587256 BRMS1LQ5PSV4 323 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 TTC39BQ5VTQ0 682 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-207ENST00000587256 SFMBT2Q5VUG0 894 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 RNF43Q68DV7 783 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 SERPINA13PQ6UXR4 307 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 DCLK2Q8N568 766 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 FAM160A2Q8N612 972 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-207ENST00000587256 CFAP57Q96MR6 1250 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 RPRD1AQ96P16 312 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-207ENST00000587256 ADAM33Q9BZ11 813 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 CALCOCO1Q9P1Z2 691 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 THAP10Q9P2Z0 257 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-207ENST00000587256 TMEM59LQ9UK28 342 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 INVSQ9Y283 1065 aa15.33■□□□□ 0.04
ATG4D-207ENST00000587256 PTPRZ1P23471 2315 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-207ENST00000587256 A0A1W2PQF6 199 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 WASH3PC4AMC7 463 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 DCLK1O15075 740 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 TIMM44O43615 452 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 SYNCRIPO60506 623 aaKnown RBP15.32■□□□□ 0.04
ATG4D-207ENST00000587256 PAGE1O75459 146 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 F9P00740 461 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 TPM3P06753 285 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 GABRG2P18507 467 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 SDC4P31431 198 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 RDXP35241 583 aaKnown RBP15.32■□□□□ 0.04
ATG4D-207ENST00000587256 IL12RB1P42701 662 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 CXCR3P49682 368 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 LMAN2Q12907 356 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 ELF2Q15723 593 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 FUT11Q495W5 492 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 TMEM215Q68D42 235 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 MBLAC2Q68D91 279 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 TRNP1Q6NT89 227 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 KIAA1211LQ6NV74 962 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 DNAJC24Q6P3W2 148 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 KBTBD6Q86V97 674 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 C11orf74Q86VG3 221 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 CIR1Q86X95 450 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-207ENST00000587256 PHF13Q86YI8 300 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-207ENST00000587256 FIBINQ8TAL6 211 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 CYB5D2Q8WUJ1 264 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 NT5C3BQ969T7 300 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 PGAP3Q96FM1 320 aaPredicted RBP15.32■□□□□ 0.04
ATG4D-207ENST00000587256 PRMT1Q99873 361 aaKnown RBP15.32■□□□□ 0.04
ATG4D-207ENST00000587256 SELENOOQ9BVL4 669 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 TTYH3Q9C0H2 523 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 TKTL2Q9H0I9 626 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 SIK2Q9H0K1 926 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 WDCPQ9H6R7 721 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 TMEM51Q9NW97 253 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 IFNKQ9P0W0 207 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 VANGL2Q9ULK5 521 aa15.32■□□□□ 0.04
ATG4D-207ENST00000587256 EML5Q05BV3 1969 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 MYO18AQ92614 2054 aaKnown RBP15.31■□□□□ 0.04
ATG4D-207ENST00000587256 A0A1B0GVM2 712 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 ANKRD62A6NC57 917 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 TCAF2A6NFQ2 919 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 MOCS3O95396 460 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 GJB6O95452 261 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 ADCY5O95622 1261 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
ATG4D-207ENST00000587256 EPHX1P07099 455 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 RETP07949 1114 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 PDGFRAP16234 1089 aa15.31■□□□□ 0.04
ATG4D-207ENST00000587256 POLR2EP19388 210 aaKnown RBP15.31■□□□□ 0.04
ATG4D-207ENST00000587256 TNFAIP3P21580 790 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms