RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 MYO19Q96H55 970 aa17■□□□□ 0.31
NPC1-205ENST00000587163 LMLNQ96KR4 655 aa17■□□□□ 0.31
NPC1-205ENST00000587163 IPO9Q96P70 1041 aaKnown RBP17■□□□□ 0.31
NPC1-205ENST00000587163 FBRSQ9HAH7 460 aa17■□□□□ 0.31
NPC1-205ENST00000587163 EBF2Q9HAK2 575 aa17■□□□□ 0.31
NPC1-205ENST00000587163 SGK2Q9HBY8 427 aa17■□□□□ 0.31
NPC1-205ENST00000587163 SERGEFQ9UGK8 458 aa17■□□□□ 0.31
NPC1-205ENST00000587163 BPTFQ12830 3046 aa17■□□□□ 0.31
NPC1-205ENST00000587163 A0A087WV48 116 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 TBL1XO60907 577 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 LATS1O95835 1130 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 ATP5BP06576 529 aaKnown RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 LCP1P13796 627 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 POLR2EP19388 210 aaKnown RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 SLC6A4P31645 630 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 SYKP43405 635 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 ZNF445P59923 1031 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 BST2Q10589 180 aaKnown RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 CBWD6Q4V339 395 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 SGO2Q562F6 1265 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 FAM133BQ5BKY9 247 aaKnown RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 CBWD3Q5JTY5 395 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 CBWD5Q5RIA9 395 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 ZNF776Q68DI1 518 aaPredicted RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 KIAA0895LQ68EN5 471 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 ADAT2Q7Z6V5 191 aaKnown RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 GATAD2AQ86YP4 633 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 SCUBE3Q8IX30 993 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 PDCD7Q8N8D1 485 aaKnown RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 RSPH9Q9H1X1 276 aaPredicted RBP16.99■□□□□ 0.31
NPC1-205ENST00000587163 ABCC13Q9NSE7 274 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 SUN2Q9UH99 717 aa16.99■□□□□ 0.31
NPC1-205ENST00000587163 A0A1B0GTQ1 180 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 FAM47DPA6NHR8 397 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 CBX4O00257 560 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 VILLO15195 856 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 PAPSS1O43252 624 aaPredicted RBP16.98■□□□□ 0.31
NPC1-205ENST00000587163 IGLV3-27P01718 113 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 WNT1P04628 370 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 GALCP54803 685 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 CLDN6P56747 220 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 DAOAP59103 153 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 RACK1P63244 317 aaKnown RBP16.98■□□□□ 0.31
NPC1-205ENST00000587163 CUL2Q13617 745 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 EDRF1Q3B7T1 1238 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 TTC31Q49AM3 519 aaPredicted RBP16.98■□□□□ 0.31
NPC1-205ENST00000587163 PKDCCQ504Y2 493 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 SMYD4Q8IYR2 804 aaPredicted RBP16.98■□□□□ 0.31
NPC1-205ENST00000587163 SIX6OS1Q8N1H7 587 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 KCTD13Q8WZ19 329 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 GOLGA1Q92805 767 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 CCDC47Q96A33 483 aaKnown RBP16.98■□□□□ 0.31
NPC1-205ENST00000587163 MYEOVQ96EZ4 313 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 SLC6A18Q96N87 628 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 PABPC3Q9H361 631 aaKnown RBP16.98■□□□□ 0.31
NPC1-205ENST00000587163 HESX1Q9UBX0 185 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 FTSJ1Q9UET6 329 aa16.98■□□□□ 0.31
NPC1-205ENST00000587163 INTS6Q9UL03 887 aaKnown RBP16.98■□□□□ 0.31
NPC1-205ENST00000587163 TP53BP1Q12888 1972 aaPredicted RBP16.97■□□□□ 0.31
NPC1-205ENST00000587163 FAM237AA0A1B0GTK4 181 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 A0A1W2PPC4 97 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 O00370 1275 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 PLK4O00444 970 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 PIK3R2O00459 728 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 WNT9AO14904 365 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 SIN3BO75182 1162 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
NPC1-205ENST00000587163 CD19P15391 556 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 RGS7P49802 495 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 SHBQ15464 509 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 MPP7Q5T2T1 576 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 NADSYN1Q6IA69 706 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 MSANTD2Q6P1R3 559 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 NCEH1Q6PIU2 408 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 USP30Q70CQ3 517 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
NPC1-205ENST00000587163 GANCQ8TET4 914 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 TFAP2BQ92481 460 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 TTC17Q96AE7 1141 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 MRGPRX3Q96LB0 322 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 ACE2Q9BYF1 805 aaPredicted RBP16.97■□□□□ 0.31
NPC1-205ENST00000587163 NEUROG2Q9H2A3 272 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 CNGB3Q9NQW8 809 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 FBXL12Q9NXK8 326 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 STIM2Q9P246 746 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 NCKAP1Q9Y2A7 1128 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 COQ4Q9Y3A0 265 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 ASXL3Q9C0F0 2248 aa16.97■□□□□ 0.31
NPC1-205ENST00000587163 A0A1W2PP55 124 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 MID1O15344 667 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 DFNA5O60443 496 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 ACSL4O60488 711 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 STX10O60499 249 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 VDRP11473 427 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 CSKP41240 450 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 C21orf59P57076 290 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 KCNJ12Q14500 433 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 C9orf64Q5T6V5 341 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 PMF1Q6P1K2 205 aa16.96■□□□□ 0.31
NPC1-205ENST00000587163 KRBA2Q6ZNG9 492 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms