RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 F5H5T6 163 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 DDX3YO15523 660 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 TNNT1P13805 278 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 HOXC13P31276 330 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 GGCXP38435 758 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 FBXL22Q6P050 247 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 LRRC31Q6UY01 552 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 EXD1Q8NHP7 514 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 TSC1Q92574 1164 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 ATP2A3Q93084 1043 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 PRICKLE1Q96MT3 831 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 ASB2Q96Q27 587 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 TRMT61BQ9BVS5 477 aaKnown RBP17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 TLR10Q9BXR5 811 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 MAGEB5Q9BZ81 275 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 PCDH18Q9HCL0 1135 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 LIMD1Q9UGP4 676 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 COL4A2P08572 1712 aa17.53■□□□□ 0.4
PRKCSH-203ENST00000586486 C19orf67A6NJJ6 358 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 FAM72CH0Y354 149 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 LRIG2O94898 1065 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 NFATC1O95644 943 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 KRT1P04264 644 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 HCAR3P49019 387 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 CDH6P55285 790 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 RWDD2BP57060 319 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 ETF1P62495 437 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 GRM2Q14416 872 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 RPS6KA1Q15418 735 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 FAM72AQ5TYM5 149 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 TTC39BQ5VTQ0 682 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 FAM72DQ6L9T8 149 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 RFWD3Q6PCD5 774 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 C14orf80Q86SX3 495 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 FAM72BQ86X60 149 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 MAP7D3Q8IWC1 876 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 ADGRG2Q8IZP9 1017 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 ALG3Q92685 438 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 ZNF670Q9BS34 389 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 LINC00597Q9H2U6 94 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 SPHK2Q9NRA0 654 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 KLHL11Q9NVR0 708 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 MARK1Q9P0L2 795 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 PPARGC1AQ9UBK2 798 aaKnown RBP17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 VANGL2Q9ULK5 521 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 SNX10Q9Y5X0 201 aa17.52■□□□□ 0.4
PRKCSH-203ENST00000586486 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 C3orf70A6NLC5 250 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 DRGXA6NNA5 263 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 ARNTLO00327 626 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 BMP1P13497 986 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 KDELR1P24390 212 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 DPYSL3Q14195 570 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 KRT81Q14533 505 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 PPP6R3Q5H9R7 873 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 RABGAP1LQ5R372 815 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 MPP7Q5T2T1 576 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 RNF43Q68DV7 783 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 LGI2Q8N0V4 545 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 KCTD6Q8NC69 237 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 HJURPQ8NCD3 748 aaPredicted RBP17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 RSAD2Q8WXG1 361 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 RAPGEF5Q92565 580 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 TBC1D31Q96DN5 1066 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 RBM41Q96IZ5 413 aaKnown RBP17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 WDR24Q96S15 920 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 RETREG1Q9H6L5 497 aa17.51■□□□□ 0.39
PRKCSH-203ENST00000586486 H3BRJ5 948 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 EEF2KO00418 725 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 ZRANB2O95218 330 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 CYP17A1P05093 508 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 GDI1P31150 447 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 ARL4AP40617 200 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 VCPP55072 806 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 TAZQ16635 292 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 MPPE1Q53F39 396 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 ZFYVE27Q5T4F4 411 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 TRIM68Q6AZZ1 485 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 RCOR2Q8IZ40 523 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 SLC44A3Q8N4M1 653 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 IRF7Q92985 503 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 FAF2Q96CS3 445 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 MYEOVQ96EZ4 313 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 ZFYVE19Q96K21 471 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 RPRD1AQ96P16 312 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 CARD9Q9H257 536 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 TRPV5Q9NQA5 729 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 HPS4Q9NQG7 708 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 CWC15Q9P013 229 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 TYW5A2RUC4 315 aaKnown RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 FGF10O15520 208 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 HOXC11O43248 304 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 CREB3O43889 395 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 ADH1CP00326 375 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 PENKP01210 267 aaPredicted RBP17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 TUBB4AP04350 444 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 CYBBP04839 570 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 CD48P09326 243 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 ARSAP15289 507 aa17.5■□□□□ 0.39
PRKCSH-203ENST00000586486 GOT1P17174 413 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms