RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KIAA0895LQ68EN5 471 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 ATL3Q6DD88 541 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 NADSYN1Q6IA69 706 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 MSANTD2Q6P1R3 559 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 GATAD2AQ86YP4 633 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 SCUBE3Q8IX30 993 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 AHI1Q8N157 1196 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 GALNT15Q8N3T1 639 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 GUF1Q8N442 669 aaKnown RBP12.38□□□□□ -0.43
BRCA1-225ENST00000586385 UBA3Q8TBC4 463 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 SNX21Q969T3 373 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 MRGPRX3Q96LB0 322 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 PRICKLE1Q96MT3 831 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-225ENST00000586385 SLC6A18Q96N87 628 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 RSPH9Q9H1X1 276 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-225ENST00000586385 SGK2Q9HBY8 427 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 PLA2G4CQ9UP65 541 aa12.38□□□□□ -0.43
BRCA1-225ENST00000586385 GCN1Q92616 2671 aaKnown RBP12.38□□□□□ -0.43
BRCA1-225ENST00000586385 A0A1W2PR77 199 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 O00370 1275 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 VILLO15195 856 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 ZIC2O95409 532 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-225ENST00000586385 LATS1O95835 1130 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 ITPKBP27987 946 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 NDUFA8P51970 172 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 BCAT1P54687 386 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 GALCP54803 685 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 DAOAP59103 153 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 ARID5AQ03989 594 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 TEAD4Q15561 434 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 ZNF776Q68DI1 518 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-225ENST00000586385 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-225ENST00000586385 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
BRCA1-225ENST00000586385 FBXL13Q8NEE6 735 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 ADAM32Q8TC27 787 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 TFAP2BQ92481 460 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 PABPC3Q9H361 631 aaKnown RBP12.37□□□□□ -0.43
BRCA1-225ENST00000586385 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 OLA1Q9NTK5 396 aaKnown RBP12.37□□□□□ -0.43
BRCA1-225ENST00000586385 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 COQ4Q9Y3A0 265 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 TMEM131Q92545 1883 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 BPTFQ12830 3046 aa12.37□□□□□ -0.43
BRCA1-225ENST00000586385 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 PLK4O00444 970 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 TLX3O43711 291 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-225ENST00000586385 TBL1XO60907 577 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 SIN3BO75182 1162 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 C1QL1O75973 258 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 DNTTP04053 509 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 PRB1P04280 392 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 CTSOP43234 321 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-225ENST00000586385 ZNF445P59923 1031 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 RACK1P63244 317 aaKnown RBP12.36□□□□□ -0.43
BRCA1-225ENST00000586385 BST2Q10589 180 aaKnown RBP12.36□□□□□ -0.43
BRCA1-225ENST00000586385 CUL2Q13617 745 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 MPP7Q5T2T1 576 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 C9orf64Q5T6V5 341 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 NCEH1Q6PIU2 408 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 USP30Q70CQ3 517 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 SCML4Q8N228 414 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 TTC39CQ8N584 583 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 CCDC150Q8NCX0 1101 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 SAP25Q8TEE9 199 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 CLEC4CQ8WTT0 213 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 KCTD13Q8WZ19 329 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 NEUROG2Q9H2A3 272 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 GOLPH3LQ9H4A5 285 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 LRRC4Q9HBW1 653 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 FTSJ1Q9UET6 329 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
BRCA1-225ENST00000586385 KNTC1P50748 2209 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 MID1O15344 667 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 CALCAP01258 141 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 FYNP06241 537 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 RPL13P26373 211 aaKnown RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 CSKP41240 450 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 RGS7P49802 495 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 RPS24P62847 133 aaKnown RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 DNAJC3Q13217 504 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 HNRNPA1L2Q32P51 320 aaKnown RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 EDRF1Q3B7T1 1238 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 TTC31Q49AM3 519 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 FSCBQ5H9T9 825 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 PMF1Q6P1K2 205 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 MMS22LQ6ZRQ5 1243 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 KANSL1Q7Z3B3 1105 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 TMPRSS12Q86WS5 348 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 AADATQ8N5Z0 425 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 RNF139Q8WU17 664 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 SLC35F5Q8WV83 523 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 TSC1Q92574 1164 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 FCRL2Q96LA5 508 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 IPO9Q96P70 1041 aaKnown RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 FAM129BQ96TA1 746 aa12.35□□□□□ -0.43
BRCA1-225ENST00000586385 ELF4Q99607 663 aaPredicted RBP12.35□□□□□ -0.43
BRCA1-225ENST00000586385 CNGB3Q9NQW8 809 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms