RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RNF139Q8WU17 664 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 SMARCD2Q92925 531 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 SERPINB11Q96P15 392 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 ZMYM5Q9UJ78 669 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 MYOFQ9NZM1 2061 aa13.09□□□□□ -0.31
VMP1-202ENST00000585847 ZNF318Q5VUA4 2279 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 LRRD1A4D1F6 860 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 TMEM221A6NGB7 291 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 HEPACAM2A8MVW5 462 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 M0R296 226 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 ZNF185O15231 689 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 MSI1O43347 362 aaKnown RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 ERLIN1O75477 346 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 IGLV3-27P01718 113 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 CKMP06732 381 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 TNFRSF8P28908 595 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 SULT1E1P49888 294 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 DNA2P51530 1060 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 ATXN1P54253 815 aaKnown RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 HDAC4P56524 1084 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 RNASE9P60153 205 aaKnown RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 EFEMP1Q12805 493 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 KLF1Q13351 362 aaPredicted RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 DCAF6Q58WW2 860 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 EFHC2Q5JST6 749 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 TEX35Q5T0J7 233 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 ZFYVE27Q5T4F4 411 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 ERMARDQ5T6L9 678 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 SPOCD1Q6ZMY3 1216 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 BBS12Q6ZW61 710 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 ADAM32Q8TC27 787 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 SH3RF2Q8TEC5 729 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 ACSF2Q96CM8 615 aaPredicted RBP13.08□□□□□ -0.32
VMP1-202ENST00000585847 SLC39A13Q96H72 371 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 RAB17Q9H0T7 212 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 RETREG1Q9H6L5 497 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 LRRC19Q9H756 370 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 TDP1Q9NUW8 608 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 SMPD4Q9NXE4 827 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 LIMD1Q9UGP4 676 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 PCYOX1Q9UHG3 505 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 DNMT3LQ9UJW3 386 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 NR2E1Q9Y466 385 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 NUMBLQ9Y6R0 609 aa13.08□□□□□ -0.32
VMP1-202ENST00000585847 SLC12A8A0AV02 714 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 CCDC151A5D8V7 595 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 LEFTY2O00292 366 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 PDE2AO00408 941 aaPredicted RBP13.07□□□□□ -0.32
VMP1-202ENST00000585847 IRAK2O43187 625 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 STC2O76061 302 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 GAS8O95995 478 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 KLKB1P03952 638 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 ASGR2P07307 311 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 AVPR1AP37288 418 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 CDKN2BP42772 138 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 MARCKSL1P49006 195 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 HCAR3P49019 387 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 TAS2R40P59535 323 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 DEUP1Q05D60 604 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 KRT81Q14533 505 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 PPP2R5DQ14738 602 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 BRD3Q15059 726 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 TRIP4Q15650 581 aaPredicted RBP13.07□□□□□ -0.32
VMP1-202ENST00000585847 CCNG2Q16589 344 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 C15orf59Q2T9L4 293 aaPredicted RBP13.07□□□□□ -0.32
VMP1-202ENST00000585847 SH3PXD2AQ5TCZ1 1133 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 Q6ZNB5 142 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 BMP8AQ7Z5Y6 402 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 ARFGAP1Q8N6T3 406 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 KCTD6Q8NC69 237 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 ELSPBP1Q96BH3 223 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 ASIC4Q96FT7 647 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 FCRL2Q96LA5 508 aaPredicted RBP13.07□□□□□ -0.32
VMP1-202ENST00000585847 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 ZWILCHQ9H900 591 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 ZFP14Q9HCL3 533 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 ANLNQ9NQW6 1124 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 OBP2AQ9NY56 170 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 STIM2Q9P246 746 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 RAD54BQ9Y620 910 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
VMP1-202ENST00000585847 hCG_1818297A0A087WSY0 165 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 I6L893 689 aaPredicted RBP13.06□□□□□ -0.32
VMP1-202ENST00000585847 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 ECI2O75521 394 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 APOC2P02655 101 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 RARAP10276 462 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 TGM2P21980 687 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 KDELR1P24390 212 aa13.06□□□□□ -0.32
VMP1-202ENST00000585847 ARL4AP40617 200 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms