RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SEMA4FO95754 770 aa15.06■□□□□ 0
SDF2-202ENST00000585428 CD70P32970 193 aa15.06■□□□□ 0
SDF2-202ENST00000585428 PRCPP42785 496 aa15.06■□□□□ 0
SDF2-202ENST00000585428 DAOAP59103 153 aa15.06■□□□□ 0
SDF2-202ENST00000585428 TEAD4Q15561 434 aa15.06■□□□□ 0
SDF2-202ENST00000585428 SOWAHCQ53LP3 525 aaPredicted RBP15.06■□□□□ 0
SDF2-202ENST00000585428 PMF1Q6P1K2 205 aa15.06■□□□□ 0
SDF2-202ENST00000585428 MSANTD2Q6P1R3 559 aa15.06■□□□□ 0
SDF2-202ENST00000585428 RFWD3Q6PCD5 774 aa15.06■□□□□ 0
SDF2-202ENST00000585428 LCLAT1Q6UWP7 414 aa15.06■□□□□ 0
SDF2-202ENST00000585428 FIBINQ8TAL6 211 aa15.06■□□□□ 0
SDF2-202ENST00000585428 WFDC5Q8TCV5 224 aa15.06■□□□□ 0
SDF2-202ENST00000585428 TFAP2BQ92481 460 aa15.06■□□□□ 0
SDF2-202ENST00000585428 SNX19Q92543 992 aa15.06■□□□□ 0
SDF2-202ENST00000585428 GOLGA1Q92805 767 aa15.06■□□□□ 0
SDF2-202ENST00000585428 RSPH9Q9H1X1 276 aaPredicted RBP15.06■□□□□ 0
SDF2-202ENST00000585428 SGK2Q9HBY8 427 aa15.06■□□□□ 0
SDF2-202ENST00000585428 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.06■□□□□ 0
SDF2-202ENST00000585428 LOC400499M0QZD8 3231 aa15.06■□□□□ 0
SDF2-202ENST00000585428 ZFYVE26Q68DK2 2539 aa15.06■□□□□ 0
SDF2-202ENST00000585428 PLXNB3Q9ULL4 1909 aa15.05■□□□□ 0
SDF2-202ENST00000585428 ATRXP46100 2492 aa15.05■□□□□ 0
SDF2-202ENST00000585428 TRABD2BA6NFA1 517 aa15.05■□□□□ -0
SDF2-202ENST00000585428 C10orf142B7Z368 130 aa15.05■□□□□ -0
SDF2-202ENST00000585428 IRAK2O43187 625 aa15.05■□□□□ -0
SDF2-202ENST00000585428 PAPSS1O43252 624 aaPredicted RBP15.05■□□□□ -0
SDF2-202ENST00000585428 DNTTP04053 509 aa15.05■□□□□ -0
SDF2-202ENST00000585428 IGHV4-34P06331 123 aa15.05■□□□□ -0
SDF2-202ENST00000585428 SETSIPP0DME0 302 aa15.05■□□□□ -0
SDF2-202ENST00000585428 LCP1P13796 627 aa15.05■□□□□ -0
SDF2-202ENST00000585428 POLR2EP19388 210 aaKnown RBP15.05■□□□□ -0
SDF2-202ENST00000585428 SLC6A4P31645 630 aa15.05■□□□□ -0
SDF2-202ENST00000585428 CTSKP43235 329 aa15.05■□□□□ -0
SDF2-202ENST00000585428 FKBP3Q00688 224 aaKnown RBP15.05■□□□□ -0
SDF2-202ENST00000585428 ARID5BQ14865 1188 aa15.05■□□□□ -0
SDF2-202ENST00000585428 SMAD1Q15797 465 aaKnown RBP15.05■□□□□ -0
SDF2-202ENST00000585428 CNGA2Q16280 664 aa15.05■□□□□ -0
SDF2-202ENST00000585428 COL28A1Q2UY09 1125 aa15.05■□□□□ -0
SDF2-202ENST00000585428 COBLL1Q53SF7 1204 aa15.05■□□□□ -0
SDF2-202ENST00000585428 FAM133BQ5BKY9 247 aaKnown RBP15.05■□□□□ -0
SDF2-202ENST00000585428 ANKRD40Q6AI12 368 aa15.05■□□□□ -0
SDF2-202ENST00000585428 USP30Q70CQ3 517 aa15.05■□□□□ -0
SDF2-202ENST00000585428 PDZD3Q86UT5 571 aa15.05■□□□□ -0
SDF2-202ENST00000585428 MARCH9Q86YJ5 346 aa15.05■□□□□ -0
SDF2-202ENST00000585428 UNC45BQ8IWX7 931 aa15.05■□□□□ -0
SDF2-202ENST00000585428 GALNT15Q8N3T1 639 aa15.05■□□□□ -0
SDF2-202ENST00000585428 HNRNPLLQ8WVV9 542 aaKnown RBP15.05■□□□□ -0
SDF2-202ENST00000585428 IRGQQ8WZA9 623 aa15.05■□□□□ -0
SDF2-202ENST00000585428 ZSWIM1Q9BR11 485 aa15.05■□□□□ -0
SDF2-202ENST00000585428 MTG2Q9H4K7 406 aa15.05■□□□□ -0
SDF2-202ENST00000585428 SCML1Q9UN30 329 aa15.05■□□□□ -0
SDF2-202ENST00000585428 RAXQ9Y2V3 346 aa15.05■□□□□ -0
SDF2-202ENST00000585428 H0Y8X5 98 aa15.04■□□□□ -0
SDF2-202ENST00000585428 RNF225M0QZC1 329 aaPredicted RBP15.04■□□□□ -0
SDF2-202ENST00000585428 VILLO15195 856 aa15.04■□□□□ -0
SDF2-202ENST00000585428 SLC16A3O15427 465 aaKnown RBP15.04■□□□□ -0
SDF2-202ENST00000585428 DFNA5O60443 496 aa15.04■□□□□ -0
SDF2-202ENST00000585428 ACSL4O60488 711 aa15.04■□□□□ -0
SDF2-202ENST00000585428 TBL1XO60907 577 aa15.04■□□□□ -0
SDF2-202ENST00000585428 FSBPO95073 299 aa15.04■□□□□ -0
SDF2-202ENST00000585428 FYNP06241 537 aa15.04■□□□□ -0
SDF2-202ENST00000585428 PAEPP09466 180 aa15.04■□□□□ -0
SDF2-202ENST00000585428 CD19P15391 556 aa15.04■□□□□ -0
SDF2-202ENST00000585428 GRK6P43250 576 aa15.04■□□□□ -0
SDF2-202ENST00000585428 SLC11A2P49281 568 aa15.04■□□□□ -0
SDF2-202ENST00000585428 PMS1P54277 932 aaKnown RBP15.04■□□□□ -0
SDF2-202ENST00000585428 GALCP54803 685 aa15.04■□□□□ -0
SDF2-202ENST00000585428 YWHAEP62258 255 aaKnown RBP15.04■□□□□ -0
SDF2-202ENST00000585428 SIX6OS1Q8N1H7 587 aa15.04■□□□□ -0
SDF2-202ENST00000585428 SLC35C1Q96A29 364 aa15.04■□□□□ -0
SDF2-202ENST00000585428 MRGPRX3Q96LB0 322 aa15.04■□□□□ -0
SDF2-202ENST00000585428 SCAND2PQ9GZW5 306 aaPredicted RBP15.04■□□□□ -0
SDF2-202ENST00000585428 EBF2Q9HAK2 575 aa15.04■□□□□ -0
SDF2-202ENST00000585428 SCUBE2Q9NQ36 999 aa15.04■□□□□ -0
SDF2-202ENST00000585428 INTS6Q9UL03 887 aaKnown RBP15.04■□□□□ -0
SDF2-202ENST00000585428 BAHCC1Q9P281 2608 aa15.04■□□□□ -0
SDF2-202ENST00000585428 A0A1W2PPC4 97 aa15.03■□□□□ -0
SDF2-202ENST00000585428 PMM2O15305 246 aa15.03■□□□□ -0
SDF2-202ENST00000585428 TBXAS1P24557 533 aaPredicted RBP15.03■□□□□ -0
SDF2-202ENST00000585428 RACK1P63244 317 aaKnown RBP15.03■□□□□ -0
SDF2-202ENST00000585428 CYP4F3Q08477 520 aa15.03■□□□□ -0
SDF2-202ENST00000585428 HNRNPA1L2Q32P51 320 aaKnown RBP15.03■□□□□ -0
SDF2-202ENST00000585428 DCAF17Q5H9S7 520 aaPredicted RBP15.03■□□□□ -0
SDF2-202ENST00000585428 C9orf64Q5T6V5 341 aa15.03■□□□□ -0
SDF2-202ENST00000585428 ZNF658Q5TYW1 1059 aaPredicted RBP15.03■□□□□ -0
SDF2-202ENST00000585428 TCERG1LQ5VWI1 586 aa15.03■□□□□ -0
SDF2-202ENST00000585428 NUGGCQ68CJ6 796 aa15.03■□□□□ -0
SDF2-202ENST00000585428 ZNF776Q68DI1 518 aaPredicted RBP15.03■□□□□ -0
SDF2-202ENST00000585428 KIAA0895LQ68EN5 471 aa15.03■□□□□ -0
SDF2-202ENST00000585428 NADSYN1Q6IA69 706 aa15.03■□□□□ -0
SDF2-202ENST00000585428 LAYNQ6UX15 382 aa15.03■□□□□ -0
SDF2-202ENST00000585428 ZNF557Q8N988 423 aaPredicted RBP15.03■□□□□ -0
SDF2-202ENST00000585428 KDM1BQ8NB78 822 aa15.03■□□□□ -0
SDF2-202ENST00000585428 MYEOVQ96EZ4 313 aa15.03■□□□□ -0
SDF2-202ENST00000585428 NEUROG2Q9H2A3 272 aa15.03■□□□□ -0
SDF2-202ENST00000585428 PABPC3Q9H361 631 aaKnown RBP15.03■□□□□ -0
SDF2-202ENST00000585428 NCKAP1Q9Y2A7 1128 aa15.03■□□□□ -0
SDF2-202ENST00000585428 CKAP5Q14008 2032 aa15.03■□□□□ -0
SDF2-202ENST00000585428 CELSR3Q9NYQ7 3312 aa15.02■□□□□ -0
SDF2-202ENST00000585428 A0A1B0GTQ1 180 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms