RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 DENND2CQ68D51 928 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 C1orf228Q6PIY5 440 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 PPP1R21Q6ZMI0 780 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 PPIL6Q8IXY8 311 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 RNF168Q8IYW5 571 aaPredicted RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 ZNF276Q8N554 614 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 ZCCHC9Q8N567 271 aaKnown RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 CCDC185Q8N715 623 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 PIK3R5Q8WYR1 880 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 EDAQ92838 391 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 IGSF21Q96ID5 467 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 ZNF558Q96NG5 402 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 HAPLN3Q96S86 360 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 EPAS1Q99814 870 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 FAM118BQ9BPY3 351 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 TMEM121Q9BTD3 319 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 TMEM109Q9BVC6 243 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 RHOBTB2Q9BYZ6 727 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 ROPN1BQ9BZX4 212 aaPredicted RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 ROPN1Q9HAT0 212 aaPredicted RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 WDR6Q9NNW5 1121 aaKnown RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 PIGVQ9NUD9 493 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 DONSONQ9NYP3 566 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 CLIC5Q9NZA1 410 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 CWC15Q9P013 229 aaKnown RBP10.74□□□□□ -0.69
LIG3-203ENST00000585370 PAK5Q9P286 719 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 MTRRQ9UBK8 725 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 TSC2P49815 1807 aa10.74□□□□□ -0.69
LIG3-203ENST00000585370 HIDE1A8MVS5 230 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 EEF2KO00418 725 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 STK10O94804 968 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 OR4Q2P0C623 313 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 MYZAPP0CAP1 466 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 PECAM1P16284 738 aaPredicted RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 YWHAQP27348 245 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 CCR1P32246 355 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 PBX3P40426 434 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 ATXN1P54253 815 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 IFFO1Q0D2I5 559 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SEMA3BQ13214 749 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 EIF4EBP2Q13542 120 aaPredicted RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 PPP2R5DQ14738 602 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 PAFAH1B3Q15102 231 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 PDK1Q15118 436 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SLC45A4Q5BKX6 768 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 TPGS2Q68CL5 300 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SLC8B1Q6J4K2 584 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 PDE12Q6L8Q7 609 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 KIAA1841Q6NSI8 718 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 MSANTD2Q6P1R3 559 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 KCNT2Q6UVM3 1135 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 TMEM184AQ6ZMB5 413 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 DENND5BQ6ZUT9 1274 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 SCAMP5Q8TAC9 235 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 DQX1Q8TE96 717 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 SUSD6Q92537 303 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 RNF34Q969K3 372 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 TTC25Q96NG3 672 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SERPINB11Q96P15 392 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 CDK5RAP1Q96SZ6 601 aaKnown RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 CDCA3Q99618 268 aaPredicted RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 CCDC77Q9BR77 488 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 PHF7Q9BWX1 381 aaPredicted RBP10.73□□□□□ -0.69
LIG3-203ENST00000585370 S1PR5Q9H228 398 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 USP29Q9HBJ7 922 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 ARHGEF38Q9NXL2 777 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SPG21Q9NZD8 308 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 LZTS1Q9Y250 596 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 HEY1Q9Y5J3 304 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 NFS1Q9Y697 457 aa10.73□□□□□ -0.69
LIG3-203ENST00000585370 SYNJ2BP-COX16A0A087WUM0 186 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 MTMR11A4FU01 709 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 C5orf60A6NFR6 353 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 HMGB1P1B2RPK0 211 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 H3BQF6 201 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 PPP1R12AO14974 1030 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 TP73O15350 636 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 IRAK2O43187 625 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 MTSS1O43312 755 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 GCATO75600 419 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 SOD2P04179 222 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 TSHRP16473 764 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 GOT1P17174 413 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 MX2P20592 715 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 AMPD1P23109 780 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 SERPINB6P35237 376 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 RPL22P35268 128 aaKnown RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 PPM1AP35813 382 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 VPS41P49754 854 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 KPNA1P52294 538 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 TPI1P60174 286 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 PITX1P78337 314 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 NRG1Q02297 640 aaPredicted RBP10.72□□□□□ -0.69
LIG3-203ENST00000585370 NHLH1Q02575 133 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 CREMQ03060 361 aa10.72□□□□□ -0.69
LIG3-203ENST00000585370 DPYSQ14117 519 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms