RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 TM6SF2Q9BZW4 377 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 CHRAC1Q9NRG0 131 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PACSIN3Q9UKS6 424 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 SPTBN2O15020 2390 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 TCRBV9S1A1TA0A576 114 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PER2O15055 1255 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 TP73O15350 636 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 GPX6P59796 221 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 RPS24P62847 133 aaKnown RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 BTG3Q14201 252 aaPredicted RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 E2F5Q15329 346 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 ANKRD20A2Q5SQ80 823 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 ANKRD20A1Q5TYW2 823 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 GKAP1Q5VSY0 366 aaPredicted RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 ANKRD20A3Q5VUR7 823 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 SLC24A5Q71RS6 500 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 TAOK1Q7L7X3 1001 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 LRRC6Q86X45 466 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PPM1EQ8WY54 764 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 SCYL1Q96KG9 808 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PITPNM3Q9BZ71 974 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 DMAP1Q9NPF5 467 aaPredicted RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 COMMD10Q9Y6G5 202 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 COL1A2P08123 1366 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 LOC102724159A0A0B4J2E5 919 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 CBX4O00257 560 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PMM2O15305 246 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PHGDHO43175 533 aaKnown RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 RAG1P15918 1043 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 DAOAP59103 153 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 ADAM17P78536 824 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 INCA1Q0VD86 236 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 CTBP1Q13363 440 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PWP2Q15269 919 aaKnown RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 RPS27LQ71UM5 84 aaKnown RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 PACS2Q86VP3 889 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 DENND1CQ8IV53 801 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 NDUFAF2Q8N183 169 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 HIPK4Q8NE63 616 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 TCP10LQ8TDR4 215 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PRCCQ92733 491 aaPredicted RBP10.58□□□□□ -0.72
RFFL-212ENST00000584655 RILPQ96NA2 401 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 RUNDC3BQ96NL0 473 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 FSD1LQ9BXM9 530 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 ZCWPW1Q9H0M4 648 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 OSER1Q9NX31 292 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 PSAT1Q9Y617 370 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 DOCK6Q96HP0 2047 aa10.58□□□□□ -0.72
RFFL-212ENST00000584655 A0A087WUV0 522 aaPredicted RBP10.57□□□□□ -0.72
RFFL-212ENST00000584655 H3BRJ5 948 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 BMP1P13497 986 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 DEFB103AP81534 67 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 LMNB2Q03252 620 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 OASLQ15646 514 aaKnown RBP10.57□□□□□ -0.72
RFFL-212ENST00000584655 ARL13BQ3SXY8 428 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 NAPRTQ6XQN6 538 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 TMEM110Q86TL2 294 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 VSIG1Q86XK7 387 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 SNX31Q8N9S9 440 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 BLOC1S5Q8TDH9 187 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 RMDN2Q96LZ7 410 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 RBM22Q9NW64 420 aaKnown RBP eCLIP10.57□□□□□ -0.722e-7■■■■□ 22.2
RFFL-212ENST00000584655 OR51F1A6NGY5 319 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 MTA2O94776 668 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 ATP2A2P16615 1042 aaKnown RBP10.57□□□□□ -0.72
RFFL-212ENST00000584655 BGNP21810 368 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 LHX1P48742 406 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 ARHGEF6Q15052 776 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
RFFL-212ENST00000584655 LRRC8CQ8TDW0 803 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 LINC01599Q8WXQ3 324 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 NDNQ99608 321 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 ARMCX1Q9P291 453 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 C3orf70A6NLC5 250 aaPredicted RBP10.57□□□□□ -0.72
RFFL-212ENST00000584655 NEMP1O14524 444 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 LPXNO60711 386 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 FYNP06241 537 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 KLRC2P26717 231 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 ELF1P32519 619 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 TAP1Q03518 808 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 ACTN3Q08043 901 aaPredicted RBP10.57□□□□□ -0.72
RFFL-212ENST00000584655 TMC7Q7Z402 723 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 CD302Q8IX05 232 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 TMEM237Q96Q45 408 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 CYP4F12Q9HCS2 524 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 SYBUQ9NX95 663 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 WHRNQ9P202 907 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 BAIAP2L1Q9UHR4 511 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 SLC45A1Q9Y2W3 748 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 COL6A3P12111 3177 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 ZSWIM8A7E2V4 1837 aa10.57□□□□□ -0.72
RFFL-212ENST00000584655 CLUHO75153 1309 aa10.56□□□□□ -0.72
RFFL-212ENST00000584655 OTOFQ9HC10 1997 aa10.56□□□□□ -0.72
RFFL-212ENST00000584655 H0Y3Z8 333 aa10.56□□□□□ -0.72
RFFL-212ENST00000584655 XPO1O14980 1071 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms