RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 NFKB1P19838 968 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-217ENST00000584582 NOS2P35228 1153 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 GJA9P57773 515 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 DLG2Q15700 870 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 HABP4Q5JVS0 413 aaKnown RBP11.61□□□□□ -0.55
TOP3A-217ENST00000584582 LRRC52Q8N7C0 313 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 PTPRN2Q92932 1015 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 SLCO2A1Q92959 643 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 MFSD3Q96ES6 412 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 LRRC37AA6NMS7 1700 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 ANP32DO95626 131 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 L1CAMP32004 1257 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 PDK4Q16654 411 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 C10orf120Q5SQS8 335 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 C1orf146Q5VVC0 180 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 FAM228AQ86W67 206 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 UNC93AQ86WB7 457 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 ALKBH8Q96BT7 664 aaKnown RBP11.61□□□□□ -0.55
TOP3A-217ENST00000584582 DUSP16Q9BY84 665 aa11.61□□□□□ -0.55
TOP3A-217ENST00000584582 NOP53Q9NZM5 478 aaKnown RBP11.61□□□□□ -0.55
TOP3A-217ENST00000584582 SMIM35A0A1B0GVV1 85 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 UBA6A0AVT1 1052 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 FAM72CH0Y354 149 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 ODC1P11926 461 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 CRYBB1P53674 252 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 MRPS6P82932 125 aaKnown RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 SLC12A1Q13621 1099 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 ACAP1Q15027 740 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 RASA2Q15283 850 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 FAM72AQ5TYM5 149 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 FAM72DQ6L9T8 149 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 FAM72BQ86X60 149 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 RNF148Q8N7C7 305 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 APOPT1Q96IL0 206 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 SP110Q9HB58 689 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 RBM22Q9NW64 420 aaKnown RBP eCLIP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 CNTN6Q9UQ52 1028 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 ZNF831Q5JPB2 1677 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 A0A0A0MRY4 1105 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 CFAP73A6NFT4 308 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 TRDMT1O14717 391 aaKnown RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 EDF1O60869 148 aaKnown RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 ASMTLO95671 621 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 MT-CYBP00156 380 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 ASGR1P07306 291 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 CXCR3P49682 368 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 YWHAHQ04917 246 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-217ENST00000584582 TCEAL1Q15170 157 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 CNPY4Q8N129 248 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 ATAD1Q8NBU5 361 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 GIPC2Q8TF65 315 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 GLT1D1Q96MS3 346 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 SPATA13Q96N96 652 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 FICDQ9BVA6 458 aa11.6□□□□□ -0.55
TOP3A-217ENST00000584582 ARL5CA6NH57 179 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 FCHO1O14526 889 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 GPR182O15218 404 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ZBTB24O43167 697 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CRCPO75575 148 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CRHR2Q13324 411 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CTBP1Q13363 440 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ACCSLQ4AC99 568 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TIGD5Q53EQ6 642 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 PPP1R15BQ5SWA1 713 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 LDLRAD1Q5T700 205 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 MYLK4Q86YV6 388 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 MS4A4AQ96JQ5 239 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 RPRD1AQ96P16 312 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 EBNA1BP2Q99848 306 aaKnown RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 OMDQ99983 421 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ZNF670Q9BS34 389 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 MTG1Q9BT17 334 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TMEM109Q9BVC6 243 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 NT5MQ9NPB1 228 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CHRAC1Q9NRG0 131 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 SPECC1L-ADORA2AF8WAN1 911 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 SKAP2O75563 359 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 ADRA1BP35368 520 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TUBP50607 506 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 PRAMEP78395 509 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 PDCD2Q16342 344 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 SLC25A52Q3SY17 297 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TAF2Q6P1X5 1199 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CDHR3Q6ZTQ4 885 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 SLC26A9Q7LBE3 791 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 DEFB128Q7Z7B8 93 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 NIPA2Q8N8Q9 360 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 EMID1Q96A84 441 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-217ENST00000584582 HSFY1Q96LI6 401 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 KLHL5Q96PQ7 755 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 TMEM209Q96SK2 561 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 GRID1Q9ULK0 1009 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CHKBQ9Y259 395 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 SSC5DA1L4H1 1573 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 CEP290O15078 2479 aa11.59□□□□□ -0.55
TOP3A-217ENST00000584582 AIM2O14862 343 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms