RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 K7ENP7 123 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 EFSO43281 561 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 SUSD5O60279 629 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 NFATC1O95644 943 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 MPOP05164 745 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 CKMP06732 381 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 HAPLN1P10915 354 aaPredicted RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 EDN3P14138 238 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 GRK6P43250 576 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 PLA2G4AP47712 749 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 AARSP49588 968 aaKnown RBP eCLIP6.6□□□□□ -1.35
CTC1-212ENST00000584439 ACADVLP49748 655 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 PCBP4P57723 403 aaKnown RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 HMGN5P82970 282 aaKnown RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 SKOR1P84550 965 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 TMPRSS15P98073 1019 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 ATP2C1P98194 919 aaPredicted RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 VEPH1Q14D04 833 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 TAF12Q16514 161 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 CCDC142Q17RM4 750 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 BROXQ5VW32 411 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 INO80CQ6PI98 192 aaPredicted RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 RHBDF2Q6PJF5 856 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 KDM7AQ6ZMT4 941 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 SPATS2Q86XZ4 545 aaKnown RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 ZBTB8OSQ8IWT0 167 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 MCPH1Q8NEM0 835 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 CCDC26Q8TAB7 109 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 IPO4Q8TEX9 1081 aaKnown RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 MRPS31Q92665 395 aaKnown RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 ZBTB45Q96K62 511 aaPredicted RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 PKNOX2Q96KN3 472 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 MRGPRX1Q96LB2 322 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 ZSCAN31Q96LW9 406 aaPredicted RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 CDK15Q96Q40 435 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 NACC1Q96RE7 527 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 DHRS4Q9BTZ2 278 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 BHMT2Q9H2M3 363 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 DDX19AQ9NUU7 478 aaKnown RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 SLC38A7Q9NVC3 462 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 WSB2Q9NYS7 404 aaPredicted RBP6.6□□□□□ -1.35
CTC1-212ENST00000584439 LRWD1Q9UFC0 647 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 GTF2A1LQ9UNN4 478 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 APCP25054 2843 aa6.6□□□□□ -1.35
CTC1-212ENST00000584439 CSMD2Q7Z408 3487 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 HIVEP1P15822 2718 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 MYMKA6NI61 221 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 METTL12A8MUP2 240 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 MEN1O00255 615 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 LEFTY2O00292 366 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 ZNF217O75362 1048 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 DNAJC8O75937 253 aaPredicted RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 HARSP12081 509 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 MUTP22033 750 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 GLDCP23378 1020 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 DDX6P26196 483 aaKnown RBP eCLIP6.59□□□□□ -1.35
CTC1-212ENST00000584439 CD6P30203 668 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 CCT6AP40227 531 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 GRIA2P42262 883 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 TNFRSF4P43489 277 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 NAMPTP43490 491 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 TUFMP49411 452 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 GEMIN4P57678 1058 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 INSM1Q01101 510 aaPredicted RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 RESTQ13127 1097 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 SAFBQ15424 915 aaKnown RBP eCLIP6.59□□□□□ -1.35
CTC1-212ENST00000584439 SHBQ15464 509 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 HSF5Q4G112 596 aaPredicted RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 HYIQ5T013 277 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 TMEM214Q6NUQ4 689 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 KIAA1324Q6UXG2 1013 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 DSTYKQ6XUX3 929 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 C1orf186Q6ZWK4 172 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 BTLAQ7Z6A9 289 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 USP37Q86T82 979 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 DHX40Q8IX18 779 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 PPM1KQ8N3J5 372 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 KCNE4Q8WWG9 221 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 LIN37Q96GY3 246 aaPredicted RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 CNDP2Q96KP4 475 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 CCDC43Q96MW1 224 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 HERPUD2Q9BSE4 406 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 TRIM9Q9C026 710 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 HAPLN2Q9GZV7 340 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 RNF38Q9H0F5 515 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 ZCWPW1Q9H0M4 648 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 ZNF768Q9H5H4 540 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 INTS7Q9NVH2 962 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 ARHGAP28Q9P2N2 729 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 ANKRD6Q9Y2G4 727 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 LUC7L2Q9Y383 392 aaKnown RBP6.59□□□□□ -1.35
CTC1-212ENST00000584439 DNHD1Q96M86 4753 aa6.59□□□□□ -1.35
CTC1-212ENST00000584439 PRRC2CQ9Y520 2896 aaKnown RBP6.59□□□□□ -1.36
CTC1-212ENST00000584439 PHLPP2Q6ZVD8 1323 aa6.58□□□□□ -1.36
CTC1-212ENST00000584439 NAV3Q8IVL0 2385 aa6.58□□□□□ -1.36
CTC1-212ENST00000584439 TRAV19A0A0A6YYK7 116 aa6.58□□□□□ -1.36
CTC1-212ENST00000584439 A0A1W2PNU3 283 aaPredicted RBP6.58□□□□□ -1.36
CTC1-212ENST00000584439 ARHGEF35A5YM69 484 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms