RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PPFIA2O75334 1257 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 KLKB1P03952 638 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 HMBSP08397 361 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 TBC1D3HP0C7X1 549 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 PABPC1P11940 636 aaKnown RBP11.61□□□□□ -0.55
CASC3-208ENST00000583649 CKMT1AP12532 417 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 EFEMP1Q12805 493 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 BIRC3Q13489 604 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 CST6Q15828 149 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 BMT2Q1RMZ1 405 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 C3orf38Q5JPI3 329 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 CDCP2Q5VXM1 449 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 RRAGBQ5VZM2 374 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 TMEM215Q68D42 235 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 TBC1D3GQ6DHY5 549 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 TBC1D3CQ6IPX1 549 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 PAQR9Q6ZVX9 377 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 CCDC186Q7Z3E2 898 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 UNC93AQ86WB7 457 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 CCDC65Q8IXS2 484 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 TBC1D3Q8IZP1 549 aaPredicted RBP11.61□□□□□ -0.55
CASC3-208ENST00000583649 ZNF366Q8N895 744 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 RBBP8NLQ8NC74 664 aaPredicted RBP11.61□□□□□ -0.55
CASC3-208ENST00000583649 OR4C6Q8NH72 309 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 OR14C36Q8NHC7 312 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 TPCN2Q8NHX9 752 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 MAPK15Q8TD08 544 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 PLD4Q96BZ4 506 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 TMA16Q96EY4 203 aaKnown RBP11.61□□□□□ -0.55
CASC3-208ENST00000583649 SMOQ99835 787 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 NEUROG2Q9H2A3 272 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 KDM4CQ9H3R0 1056 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 ASCL3Q9NQ33 180 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 HSPBP1Q9NZL4 362 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 MARCH2Q9P0N8 246 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 NUDT5Q9UKK9 219 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 SATB2Q9UPW6 733 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 NME7Q9Y5B8 376 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 PCDHGA8Q9Y5G5 932 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 PIEZO2Q9H5I5 2752 aa11.61□□□□□ -0.55
CASC3-208ENST00000583649 CKAP5Q14008 2032 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 TYW5A2RUC4 315 aaKnown RBP11.6□□□□□ -0.55
CASC3-208ENST00000583649 ADH1BP00325 375 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 ASLP04424 464 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 SLFN14P0C7P3 912 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 MYF5P13349 255 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 CCDC130P13994 396 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 GOT1P17174 413 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 C5AR1P21730 350 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 HLA-FP30511 346 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 SLC8A3P57103 927 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 MYL6P60660 151 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 SNRPFP62306 86 aaKnown RBP11.6□□□□□ -0.55
CASC3-208ENST00000583649 PSMD6Q15008 389 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 MBLAC2Q68D91 279 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 SGF29Q96ES7 293 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 IRX2Q9BZI1 471 aaPredicted RBP11.6□□□□□ -0.55
CASC3-208ENST00000583649 VRTNQ9H8Y1 702 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 ABCB8Q9NUT2 735 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 PANK4Q9NVE7 773 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 OSER1Q9NX31 292 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 TJP2Q9UDY2 1190 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 PAXBP1Q9Y5B6 917 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 KNL1Q8NG31 2342 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 UBE4BO95155 1302 aa11.6□□□□□ -0.55
CASC3-208ENST00000583649 MYH10P35580 1976 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 SLC12A8A0AV02 714 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 TARSL2A2RTX5 802 aaKnown RBP11.59□□□□□ -0.55
CASC3-208ENST00000583649 MID1O15344 667 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 SDC3O75056 442 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 BEST1O76090 585 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 KIF20AO95235 890 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
CASC3-208ENST00000583649 ADORA2BP29275 332 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 SLC8A1P32418 973 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 NNMTP40261 264 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 PGFP49763 221 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 ISXQ2M1V0 245 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 SETMARQ53H47 684 aaPredicted RBP11.59□□□□□ -0.55
CASC3-208ENST00000583649 RNF219Q5W0B1 726 aaPredicted RBP11.59□□□□□ -0.55
CASC3-208ENST00000583649 KANSL1Q7Z3B3 1105 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 TMC6Q7Z403 805 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 CRYBG2Q8N1P7 616 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.59□□□□□ -0.55
CASC3-208ENST00000583649 KDM1BQ8NB78 822 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 ZMIZ2Q8NF64 920 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 WDR48Q8TAF3 677 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 KLHDC7BQ96G42 594 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.59□□□□□ -0.55
CASC3-208ENST00000583649 SRRTQ9BXP5 876 aaKnown RBP11.59□□□□□ -0.55
CASC3-208ENST00000583649 LRRC27Q9C0I9 530 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 OSBPL2Q9H1P3 480 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 SMYD3Q9H7B4 428 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 NMUR1Q9HB89 426 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 OLA1Q9NTK5 396 aaKnown RBP11.59□□□□□ -0.55
CASC3-208ENST00000583649 SEPT10Q9P0V9 454 aa11.59□□□□□ -0.55
CASC3-208ENST00000583649 ATXN7L1Q9ULK2 861 aaPredicted RBP11.59□□□□□ -0.55
CASC3-208ENST00000583649 A0A1B0GVM2 712 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms