RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 GTF2H1P32780 548 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 SLC8A3P57103 927 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 ZNF445P59923 1031 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 ZBTB16Q05516 673 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 ADAM9Q13443 819 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 KIAA0895LQ68EN5 471 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 TTC39CQ8N584 583 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 PDCD7Q8N8D1 485 aaKnown RBP16.82■□□□□ 0.28
SREBF1-221ENST00000583080 RNF139Q8WU17 664 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
SREBF1-221ENST00000583080 PABPC3Q9H361 631 aaKnown RBP16.82■□□□□ 0.28
SREBF1-221ENST00000583080 EBF2Q9HAK2 575 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 LRRC4Q9HBW1 653 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 RAB20Q9NX57 234 aa16.82■□□□□ 0.28
SREBF1-221ENST00000583080 BPTFQ12830 3046 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 A0A1B0GTQ1 180 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 PAPSS1O43252 624 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-221ENST00000583080 TBL1XO60907 577 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 LATS1O95835 1130 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 WNT1P04628 370 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 MCCD1P59942 119 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-221ENST00000583080 BST2Q10589 180 aaKnown RBP16.81■□□□□ 0.28
SREBF1-221ENST00000583080 DPYDQ12882 1025 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 FAM133BQ5BKY9 247 aaKnown RBP16.81■□□□□ 0.28
SREBF1-221ENST00000583080 PIK3R6Q5UE93 754 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 ATL3Q6DD88 541 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 GUF1Q8N442 669 aaKnown RBP16.81■□□□□ 0.28
SREBF1-221ENST00000583080 UBA3Q8TBC4 463 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 PIP4K2CQ8TBX8 421 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 MYEOVQ96EZ4 313 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 FAXDC2Q96IV6 333 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 LMLNQ96KR4 655 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 PRICKLE1Q96MT3 831 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-221ENST00000583080 RSPH9Q9H1X1 276 aaPredicted RBP16.81■□□□□ 0.28
SREBF1-221ENST00000583080 USP25Q9UHP3 1055 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 CFAP45Q9UL16 551 aa16.81■□□□□ 0.28
SREBF1-221ENST00000583080 NYNRINQ9P2P1 1898 aaKnown RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 A0A1W2PPC4 97 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 EIF4E1BA6NMX2 242 aaKnown RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 VILLO15195 856 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 SIN3BO75182 1162 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 IGLV3-27P01718 113 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 PRB1P04280 392 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 ATP5BP06576 529 aaKnown RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 CD19P15391 556 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 POLR2EP19388 210 aaKnown RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 CMA1P23946 247 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 ABCG1P45844 678 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 C21orf59P57076 290 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 DAOAP59103 153 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 RACK1P63244 317 aaKnown RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 DNAJC3Q13217 504 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 SHBQ15464 509 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 INAVAQ3KP66 663 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 CBWD6Q4V339 395 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 SGO2Q562F6 1265 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 CBWD3Q5JTY5 395 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 CBWD5Q5RIA9 395 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 NCEH1Q6PIU2 408 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 DHX40Q8IX18 779 aaKnown RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 SMYD4Q8IYR2 804 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 SIX6OS1Q8N1H7 587 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 GANCQ8TET4 914 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 GOLGA1Q92805 767 aa16.8■□□□□ 0.28
SREBF1-221ENST00000583080 ACE2Q9BYF1 805 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-221ENST00000583080 HELZ2Q9BYK8 2649 aaKnown RBP16.79■□□□□ 0.28
SREBF1-221ENST00000583080 A0A1W2PP55 124 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 O00370 1275 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 PIK3R2O00459 728 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 WNT9AO14904 365 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 MID1O15344 667 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 GABBR2O75899 941 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 LCP1P13796 627 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 ITPKBP27987 946 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 RGS7P49802 495 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 NDUFA8P51970 172 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 GALCP54803 685 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 CUL2Q13617 745 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 KCNJ12Q14500 433 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 NADSYN1Q6IA69 706 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 MSANTD2Q6P1R3 559 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 USP30Q70CQ3 517 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 MFN1Q8IWA4 741 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 ADAM32Q8TC27 787 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 MRGPRX3Q96LB0 322 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 ELF4Q99607 663 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-221ENST00000583080 ABCC13Q9NSE7 274 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 FBXL12Q9NXK8 326 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 STIM2Q9P246 746 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 HESX1Q9UBX0 185 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 SUN2Q9UH99 717 aa16.79■□□□□ 0.28
SREBF1-221ENST00000583080 INTS6Q9UL03 887 aaKnown RBP16.79■□□□□ 0.28
SREBF1-221ENST00000583080 KNTC1P50748 2209 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 ENC1O14682 589 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 TLX3O43711 291 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-221ENST00000583080 CSKP41240 450 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 SYKP43405 635 aa16.78■□□□□ 0.28
SREBF1-221ENST00000583080 RPS24P62847 133 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms