RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ABCB8Q9NUT2 735 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 CACNA2D2Q9NY47 1150 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 AIPL1Q9NZN9 384 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 TMEM59LQ9UK28 342 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 HCN2Q9UL51 889 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 RAB23Q9ULC3 237 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 PAXBP1Q9Y5B6 917 aa13.05□□□□□ -0.32
SMARCE1-218ENST00000582955 DMDP11532 3685 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 CCDC163A0A0D9SF12 145 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 A0A1W2PQJ5 194 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 TCRBV21S2A2A0A5A6 115 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 TMCO5BA8MYB1 307 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 CBFA2T2O43439 604 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 HRO43593 1189 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 GJB6O95452 261 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 PABPC1P11940 636 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 HNRNPLP14866 589 aaKnown RBP eCLIP13.04□□□□□ -0.323e-11■■□□□ 13.3
SMARCE1-218ENST00000582955 CNR2P34972 360 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 GGCXP38435 758 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 ATP11AP98196 1134 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 MTA1Q13330 715 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 CDH18Q13634 790 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 SIM2Q14190 667 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 EIF4HQ15056 248 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 LPAL2Q16609 132 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 CDO1Q16878 200 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 BRMS1LQ5PSV4 323 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 RABGAP1LQ5R372 815 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 ACAD10Q6JQN1 1059 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 TRNP1Q6NT89 227 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 DNAJC24Q6P3W2 148 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 CHST9Q7L1S5 443 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 MON1BQ7L1V2 547 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 ARCQ7LC44 396 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 PGBD3Q8N328 593 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 WFIKKN2Q8TEU8 576 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 RXFP2Q8WXD0 754 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 NT5C3BQ969T7 300 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 ERLEC1Q96DZ1 483 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 PGAP3Q96FM1 320 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 HINFPQ9BQA5 517 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 TPSD1Q9BZJ3 242 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 TKTL2Q9H0I9 626 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 SIK2Q9H0K1 926 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 EPC1Q9H2F5 836 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 ELOVL2Q9NXB9 296 aa13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
SMARCE1-218ENST00000582955 H0Y626 953 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 TIMM44O43615 452 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 PAGE1O75459 146 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 RPP40O75818 363 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 ADCY5O95622 1261 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 KRT3P12035 628 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 SKILP12757 684 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 PDGFRAP16234 1089 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 SDC4P31431 198 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 CD70P32970 193 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 RDXP35241 583 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 PRKCIP41743 596 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 CXCR3P49682 368 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 ATXN1P54253 815 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 E2F5Q15329 346 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 TDRD12Q587J7 1177 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 TMEM215Q68D42 235 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 PPP1R2P3Q6NXS1 205 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 ZNF571Q7Z3V5 609 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 CIR1Q86X95 450 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 AHI1Q8N157 1196 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 SUMF1Q8NBK3 374 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 C3orf20Q8ND61 904 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 FIBINQ8TAL6 211 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 HMGB4Q8WW32 186 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 SORCS1Q8WY21 1168 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 IQCDQ96DY2 449 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 RPRD1AQ96P16 312 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 PRMT1Q99873 361 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 SYT11Q9BT88 431 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 TMEM51Q9NW97 253 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 TAS2R14Q9NYV8 317 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 RAD54BQ9Y620 910 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 HS3ST4Q9Y661 456 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 STON1Q9Y6Q2 735 aa13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 MYO18AQ92614 2054 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-218ENST00000582955 ANKRD62A6NC57 917 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 WASH3PC4AMC7 463 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 NPC1O15118 1278 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 ZBTB24O43167 697 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 POLR2EP19388 210 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 IL12RB1P42701 662 aa13.02□□□□□ -0.33
SMARCE1-218ENST00000582955 GSCP56915 257 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms