RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 HSF1Q00613 529 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 DMWDQ09019 674 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 STIM1Q13586 685 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 ANXA2RQ3ZCQ2 193 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 JMJD6Q6NYC1 403 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC39A5Q6ZMH5 540 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 RBM44Q6ZP01 1051 aaKnown RBP5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 RRAGAQ7L523 313 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 TRAPPC12Q8WVT3 735 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 CPT1BQ92523 772 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 CUL5Q93034 780 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 ABHD14AQ9BUJ0 271 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 GATA5Q9BWX5 397 aaPredicted RBP5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 PPCSQ9HAB8 311 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 MLXIPLQ9NP71 852 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 RIPOR2Q9Y4F9 1068 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 PCDHA10Q9Y5I2 948 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 SPATA31A5Q5VU36 1347 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 SPATA31A7Q8IWB4 1347 aa5.14□□□□□ -1.59
SMCHD1-204ENST00000581226 WDR91A4D1P6 747 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 C3orf70A6NLC5 250 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 IPO5O00410 1097 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 RFPL3SP0C7P2 107 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 RPS6KB1P23443 525 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 HOXA7P31268 230 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 CDK7P50613 346 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 PRKG1Q13976 671 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 TBRG1Q3YBR2 411 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 GALNTL6Q49A17 601 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 TTC22Q5TAA0 569 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 ANO1Q5XXA6 986 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 RINLQ6ZS11 566 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 RHPN2Q8IUC4 686 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 GALNT15Q8N3T1 639 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 ADPRHL1Q8NDY3 354 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 PRSS3P2Q8NHM4 247 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 DDX23Q9BUQ8 820 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 TMEM120AQ9BXJ8 343 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 MYLK2Q9H1R3 596 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 TAF1DQ9H5J8 278 aaPredicted RBP5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 SFXN1Q9H9B4 322 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 SEPSECSQ9HD40 501 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 NDUFAF4Q9P032 175 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 SRP68Q9UHB9 627 aaKnown RBP5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 EMSYQ7Z589 1322 aa5.13□□□□□ -1.59
SMCHD1-204ENST00000581226 CYP3A7-CYP3A51PA0A087WV96 503 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC22A23A1A5C7 686 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 AGAP5A6NIR3 686 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 MBD3L5A6NJ08 208 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 CNTN5O94779 1100 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 AKR1A1P14550 325 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 VEGFAP15692 232 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 CYP3A7P24462 503 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SERPINA4P29622 427 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SOX2P48431 317 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SSBP2P81877 361 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SHC2P98077 582 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 ZNF91Q05481 1191 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 POSTNQ15063 836 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC9C1Q4G0N8 1177 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 EARS2Q5JPH6 523 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 MORN5Q5VZ52 161 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 TMEM88Q6PEY1 159 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SPATA5Q8NB90 893 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 CLEC4CQ8WTT0 213 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 KAT2BQ92831 832 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 VOPP1Q96AW1 172 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SIGLEC11Q96RL6 698 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 HTATIP2Q9BUP3 242 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC29A3Q9BZD2 475 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 LZTS1Q9Y250 596 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 COPG1Q9Y678 874 aaKnown RBP5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 MORC2Q9Y6X9 1032 aaPredicted RBP5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 ZNF804BA4D1E1 1349 aa5.12□□□□□ -1.59
SMCHD1-204ENST00000581226 ARHGEF17Q96PE2 2063 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 C2CD4BA6NLJ0 364 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 E5RJQ4 531 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 H0Y3Z8 333 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 SGPL1O95470 568 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 ALDOCP09972 364 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 IGFBP2P18065 325 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 TGM2P21980 687 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 CST5P28325 142 aaPredicted RBP5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 HALP42357 657 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 MMP13P45452 471 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 CPA2P48052 419 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 RCAN1P53805 252 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 SLC12A2P55011 1212 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 RPS13P62277 151 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 CFHR1Q03591 330 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 TRIP6Q15654 476 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 ZKSCAN2Q63HK3 967 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 ADGRF3Q8IZF5 1079 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 NKAPQ8N5F7 415 aaKnown RBP5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 OR6Y1Q8NGX8 325 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 BCAS4Q8TDM0 211 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 CSGALNACT1Q8TDX6 532 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 PSMD1Q99460 953 aa5.11□□□□□ -1.59
SMCHD1-204ENST00000581226 HERPUD2Q9BSE4 406 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms