RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 ZNF707Q96C28 371 aaPredicted RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZNF419Q96HQ0 510 aaPredicted RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MYRFLQ96LU7 910 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PRICKLE1Q96MT3 831 aaPredicted RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 OLFM3Q96PB7 478 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 QKIQ96PU8 341 aaKnown RBP eCLIP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PRMT1Q99873 361 aaKnown RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 KLF16Q9BXK1 252 aaPredicted RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NOL6Q9H6R4 1146 aaKnown RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 USP29Q9HBJ7 922 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 COMMD8Q9NX08 183 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SEPT10Q9P0V9 454 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DNMT3BQ9UBC3 853 aaKnown RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 OR12D3Q9UGF7 316 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DNMT3LQ9UJW3 386 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 VANGL2Q9ULK5 521 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TLR6Q9Y2C9 796 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 HCFC2Q9Y5Z7 792 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CPQQ9Y646 472 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MKI67P46013 3256 aaKnown RBP6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ALPK3Q96L96 1907 aa6.35□□□□□ -1.39
RNU4ATAC-201ENST00000580972 COL4A4P53420 1690 aaPredicted RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZNF487B1APH4 448 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GOLGA8MH3BSY2 632 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DFFAO00273 331 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 LPXNO60711 386 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TMEM63AO94886 807 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PRAMEF12O95522 483 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 APOEP02649 317 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RB1P06400 928 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RHOP08100 348 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MBL2P11226 248 aaPredicted RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CEBPBP17676 345 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TACR2P21452 398 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TGM2P21980 687 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TNFRSF8P28908 595 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 HOXC13P31276 330 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ADCY8P40145 1251 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ITGA8P53708 1063 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MLLT6P55198 1093 aaPredicted RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 RPS24P62847 133 aaKnown RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CREMQ03060 361 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 UBE3AQ05086 875 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GPS1Q13098 491 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZBTB17Q13105 803 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NNTQ13423 1086 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 OLIG2Q13516 323 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PAFAH1B3Q15102 231 aaKnown RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PRKD1Q15139 912 aaPredicted RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 UAP1Q16222 522 aaPredicted RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 P3H1Q32P28 736 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ARL13BQ3SXY8 428 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLC45A4Q5BKX6 768 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 BRMS1LQ5PSV4 323 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SNX30Q5VWJ9 437 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CCDC70Q6NSX1 233 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DRICH1Q6PGQ1 229 aaPredicted RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CHRDL2Q6WN34 429 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MICALCLQ6ZW33 695 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MAATS1Q7Z4T9 603 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GRASPQ7Z6J2 395 aaPredicted RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NLRP14Q86W24 1093 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PSTKQ8IV42 348 aaKnown RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 DENND1CQ8IV53 801 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 IFT20Q8IY31 132 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 GPR65Q8IYL9 337 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 MAB21L3Q8N8X9 362 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PDZD8Q8NEN9 1154 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 UHMK1Q8TAS1 419 aaKnown RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ITFG1Q8TB96 612 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 FBXO25Q8TCJ0 367 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 USP33Q8TEY7 942 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 UBE2Q2Q8WVN8 375 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SEC14L1Q92503 715 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 P3H4Q92791 437 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLCO2A1Q92959 643 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 BHMTQ93088 406 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TBC1D31Q96DN5 1066 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TRMT2BQ96GJ1 504 aaKnown RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ZSWIM3Q96MP5 696 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 HAPLN3Q96S86 360 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 EPAS1Q99814 870 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NCAPGQ9BPX3 1015 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 TRIM62Q9BVG3 475 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLC46A2Q9BY10 475 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 SLC39A8Q9C0K1 460 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 NACA2Q9H009 215 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 OSBPL2Q9H1P3 480 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ADAM7Q9H2U9 754 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 ATXN3LQ9H3M9 355 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 PRDM12Q9H4Q4 367 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 IGFLR1Q9H665 355 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CFAP97Q9P2B7 532 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 HSFX1Q9UBD0 423 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 AGO1Q9UL18 857 aaKnown RBP6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 CCL26Q9Y258 94 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 EFR3BQ9Y2G0 817 aa6.34□□□□□ -1.39
RNU4ATAC-201ENST00000580972 UTP11Q9Y3A2 253 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms