RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 EPN3Q9H201 632 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 MTG2Q9H4K7 406 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 NMUR1Q9HB89 426 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 BLOC1S4Q9NUP1 217 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 INTS13Q9NVM9 706 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 U3KQA8 63 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 ZFC3H1O60293 1989 aaKnown RBP8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 POLQO75417 2590 aa8.06□□□□□ -1.12
SMARCE1-217ENST00000580654 ICE1Q9Y2F5 2266 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 TTC24A2A3L6 582 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 NOBOXO60393 691 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 TACC1O75410 805 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 REC8O95072 547 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 ITGB2P05107 769 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 TMEM191BP0C7N4 346 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 POU3F2P20265 443 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 ATP5C1P36542 298 aaKnown RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 IRX6P78412 446 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 DAB2P98082 770 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 DHX8Q14562 1220 aaKnown RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 POSTNQ15063 836 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 DTHD1Q6ZMT9 781 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 USP30Q70CQ3 517 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 DYMQ7RTS9 669 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 ZNF720Q7Z2F6 126 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 CLEC14AQ86T13 490 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM26EQ8N5C1 309 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 KCTD17Q8N5Z5 321 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 KRI1Q8N9T8 703 aaKnown RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 CCDC97Q96F63 343 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 ATXN7L3BQ96GX2 97 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 SMOQ99835 787 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 PABPC3Q9H361 631 aaKnown RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 SNX25Q9H3E2 840 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 ZHX3Q9H4I2 956 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 UCKL1Q9NWZ5 548 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 COMMD8Q9NX08 183 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 ATXN7L1Q9ULK2 861 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 ENTPD2Q9Y5L3 495 aa8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 SETD2Q9BYW2 2564 aaPredicted RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 SPENQ96T58 3664 aaKnown RBP8.05□□□□□ -1.12
SMARCE1-217ENST00000580654 CACNA1DQ01668 2161 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 A0A1W2PP55 124 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 CASC3O15234 703 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 CYP26A1O43174 497 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 EPB41L2O43491 1005 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 TIMM44O43615 452 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 CST3P01034 146 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 CKMT1AP12532 417 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 RBMS1P29558 406 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 HLA-FP30511 346 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 PLA2G4AP47712 749 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 CCR5P51681 352 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 PPP2CBP62714 309 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 PPP2CAP67775 309 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 GOLGA8FQ08AF8 430 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 GOLGA8DPQ0D2H9 430 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 MCM6Q14566 821 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 CLCA4Q14CN2 919 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 TBR1Q16650 682 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 SKIDA1Q1XH10 827 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 TTC31Q49AM3 519 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 FNDC3BQ53EP0 1204 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 SGO2Q562F6 1265 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 ZNF776Q68DI1 518 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 KLHDC10Q6PID8 442 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 GPRIN1Q7Z2K8 1008 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 TMC6Q7Z403 805 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 ADIPOR2Q86V24 386 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 FUKQ8N0W3 1084 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 OXR1Q8N573 874 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 OR2T34Q8NGX1 318 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 OR4C6Q8NH72 309 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 SGF29Q96ES7 293 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 LIN37Q96GY3 246 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 MYO19Q96H55 970 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 SERAC1Q96JX3 654 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 SPSB2Q99619 263 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 ARHGAP9Q9BRR9 750 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 CBWD1Q9BRT8 395 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 OSBPL2Q9H1P3 480 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 RSPH9Q9H1X1 276 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 NEUROG2Q9H2A3 272 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 FBRSQ9HAH7 460 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 DMAP1Q9NPF5 467 aaPredicted RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 TLR8Q9NR97 1041 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 FBXL12Q9NXK8 326 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 NOL7Q9UMY1 257 aaKnown RBP8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 PCDHGA8Q9Y5G5 932 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 SCN8AQ9UQD0 1980 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 NBASA2RRP1 2371 aa8.04□□□□□ -1.12
SMARCE1-217ENST00000580654 LRRK1Q38SD2 2015 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 CRYBG3Q68DQ2 2970 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 A0A1W2PQH9 124 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 A8MXQ7 604 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 PPFIA2O75334 1257 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 GP1BAP07359 652 aa8.03□□□□□ -1.12
SMARCE1-217ENST00000580654 FAM163BP0C2L3 166 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms