RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 ACADMP11310 421 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 PRKCHP24723 683 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 RGS7P49802 495 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 ATXN3P54252 364 aaPredicted RBP15.05■□□□□ -0
SMARCE1-216ENST00000580419 OXCT1P55809 520 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 YWHAZP63104 245 aaKnown RBP15.05■□□□□ -0
SMARCE1-216ENST00000580419 EXOC3L4Q17RC7 722 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 TTC39BQ5VTQ0 682 aaPredicted RBP15.05■□□□□ -0
SMARCE1-216ENST00000580419 IL27RAQ6UWB1 636 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 KIAA1324Q6UXG2 1013 aaKnown RBP15.05■□□□□ -0
SMARCE1-216ENST00000580419 USP30Q70CQ3 517 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 CHST9Q7L1S5 443 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 ARMCX6Q7L4S7 300 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 SCUBE3Q8IX30 993 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 C1orf216Q8TAB5 229 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 BTN2A3PQ96KV6 586 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 ABCB8Q9NUT2 735 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.05■□□□□ -0
SMARCE1-216ENST00000580419 FAM208BQ5VWN6 2430 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 CFAP47Q6ZTR5 3102 aa15.05■□□□□ -0
SMARCE1-216ENST00000580419 ASPMQ8IZT6 3477 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 FAM221BA6H8Z2 402 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 TMEM8BA6NDV4 472 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 KCNJ18B7U540 433 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 BIN1O00499 593 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 PAPSS1O43252 624 aaPredicted RBP15.04■□□□□ -0
SMARCE1-216ENST00000580419 CFIP05156 583 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 SRPRAP08240 638 aaKnown RBP15.04■□□□□ -0
SMARCE1-216ENST00000580419 POLR2EP19388 210 aaKnown RBP15.04■□□□□ -0
SMARCE1-216ENST00000580419 ERCC5P28715 1186 aaPredicted RBP15.04■□□□□ -0
SMARCE1-216ENST00000580419 GNA15P30679 374 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 ZNF252P-AS1Q0IIN9 211 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 MS4A13Q5J8X5 152 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 ACBD5Q5T8D3 534 aaPredicted RBP15.04■□□□□ -0
SMARCE1-216ENST00000580419 MBLAC2Q68D91 279 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 IRF2BP1Q8IU81 584 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 FAM114A1Q8IWE2 563 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 PPP1R9BQ96SB3 815 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 SGK2Q9HBY8 427 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 CHMP5Q9NZZ3 219 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 ZZEF1O43149 2961 aa15.04■□□□□ -0
SMARCE1-216ENST00000580419 ITIH6Q6UXX5 1313 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 TARSL2A2RTX5 802 aaKnown RBP15.03■□□□□ -0
SMARCE1-216ENST00000580419 C10orf142B7Z368 130 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 APOEP02649 317 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 KRT5P13647 590 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 SLC6A4P31645 630 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 STX17P56962 302 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 BPIFB4P59827 614 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 PDCLQ13371 301 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 PLEKHG6Q3KR16 790 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 EFHC1Q5JVL4 640 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 NADSYN1Q6IA69 706 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 DBX2Q6ZNG2 339 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 CLEC17AQ6ZS10 378 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 ZDHHC17Q8IUH5 632 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 MFN1Q8IWA4 741 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 CCDC117Q8IWD4 279 aaPredicted RBP15.03■□□□□ -0
SMARCE1-216ENST00000580419 MINDY1Q8N5J2 469 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 CLEC4CQ8WTT0 213 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 MYO19Q96H55 970 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 NOX5Q96PH1 765 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 SLC2A13Q96QE2 648 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 RSPH9Q9H1X1 276 aaPredicted RBP15.03■□□□□ -0
SMARCE1-216ENST00000580419 PRSS16Q9NQE7 514 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 RRN3Q9NYV6 651 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 KIAA1522Q9P206 1035 aaPredicted RBP15.03■□□□□ -0
SMARCE1-216ENST00000580419 SLC12A6Q9UHW9 1150 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 PCDHGB2Q9Y5G2 931 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 ANKRD11Q6UB99 2663 aaPredicted RBP15.03■□□□□ -0
SMARCE1-216ENST00000580419 DMXL2Q8TDJ6 3036 aa15.03■□□□□ -0
SMARCE1-216ENST00000580419 BECN2A8MW95 431 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 CAPN9O14815 690 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 TSPAN3O60637 253 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 TBL1XO60907 577 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 HSF2BPO75031 334 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 LETM1O95202 739 aaPredicted RBP15.02■□□□□ -0
SMARCE1-216ENST00000580419 CD59P13987 128 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 PON1P27169 355 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 RDXP35241 583 aaKnown RBP15.02■□□□□ -0
SMARCE1-216ENST00000580419 SCNN1AP37088 669 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 PLK1P53350 603 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 PTK2Q05397 1052 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 SULT2A1Q06520 285 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 MAN2A1Q16706 1144 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 ZNF423Q2M1K9 1284 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 HNRNPA1L2Q32P51 320 aaKnown RBP15.02■□□□□ -0
SMARCE1-216ENST00000580419 TTC31Q49AM3 519 aaPredicted RBP15.02■□□□□ -0
SMARCE1-216ENST00000580419 FNDC3BQ53EP0 1204 aaKnown RBP15.02■□□□□ -0
SMARCE1-216ENST00000580419 GLRX5Q86SX6 157 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 RGL4Q8IZJ4 473 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 ATP6V0D2Q8N8Y2 350 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 ZNF397Q8NF99 534 aaPredicted RBP15.02■□□□□ -0
SMARCE1-216ENST00000580419 SORCS1Q8WY21 1168 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 FAM149B1Q96BN6 582 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 PRICKLE1Q96MT3 831 aaPredicted RBP15.02■□□□□ -0
SMARCE1-216ENST00000580419 GPR174Q9BXC1 333 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 MIS12Q9H081 205 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 SLC6A17Q9H1V8 727 aa15.02■□□□□ -0
SMARCE1-216ENST00000580419 ST7Q9NRC1 585 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms