RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 SCML1Q9UN30 329 aa13.93□□□□□ -0.18
TRAF4-214ENST00000580073 PKD1L2Q7Z442 2459 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 WDFY3Q8IZQ1 3526 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 KCNJ18B7U540 433 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 DFNA5O60443 496 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 SEMA4FO95754 770 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 VDRP11473 427 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 CD19P15391 556 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 SLC11A2P49281 568 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 CCT8P50990 548 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 ST8SIA6P61647 398 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 FAM193AP78312 1265 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 RING1Q06587 406 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 CUL2Q13617 745 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 ACAP1Q15027 740 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 STILQ15468 1287 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 CCDC40Q4G0X9 1142 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 CT47A1Q5JQC4 288 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-214ENST00000580073 MPP7Q5T2T1 576 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 ADAT2Q7Z6V5 191 aaKnown RBP13.92□□□□□ -0.18
TRAF4-214ENST00000580073 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRAF4-214ENST00000580073 SKA1Q96BD8 255 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 CAMK1GQ96NX5 476 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 SGK2Q9HBY8 427 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 SUN2Q9UH99 717 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 GGA2Q9UJY4 613 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 STOML2Q9UJZ1 356 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 NCKAP1Q9Y2A7 1128 aa13.92□□□□□ -0.18
TRAF4-214ENST00000580073 RNASEH1O60930 286 aaKnown RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 CBFA2T3O75081 653 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 PABPC1P11940 636 aaKnown RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 POLR2EP19388 210 aaKnown RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 GRK6P43250 576 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 SCAPQ12770 1279 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 CETN1Q12798 172 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 HLA-BQ31612 363 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 CDKAL1Q5VV42 579 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 ZNF776Q68DI1 518 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 CCNI2Q6ZMN8 369 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 CHST9Q7L1S5 443 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 FAM124AQ86V42 546 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 DHX40Q8IX18 779 aaKnown RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 RBBP8NLQ8NC74 664 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 LMO3Q8TAP4 145 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 RHBDD1Q8TEB9 315 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 KCTD13Q8WZ19 329 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 IRGQQ8WZA9 623 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 IGSF8Q969P0 613 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 TMA16Q96EY4 203 aaKnown RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 TRIM62Q9BVG3 475 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 THAP9Q9H5L6 903 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 METTL14Q9HCE5 456 aaKnown RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 FANCLQ9NW38 375 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 DACH1Q9UI36 760 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 TPX2Q9ULW0 747 aaKnown RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-214ENST00000580073 COQ4Q9Y3A0 265 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 AKAP13Q12802 2813 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 CABIN1Q9Y6J0 2220 aa13.91□□□□□ -0.18
TRAF4-214ENST00000580073 ACACAQ13085 2346 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 SART1O43290 800 aaKnown RBP13.9□□□□□ -0.18
TRAF4-214ENST00000580073 ASLP04424 464 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 PAEPP09466 180 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 DLDP09622 509 aaKnown RBP13.9□□□□□ -0.18
TRAF4-214ENST00000580073 C7P10643 843 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 HLA-FP30511 346 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 FMO5P49326 533 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 KCNH2Q12809 1159 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 IQCB1Q15051 598 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 MIIPQ5JXC2 388 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 BSPRYQ5W0U4 402 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 MSANTD2Q6P1R3 559 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 USP30Q70CQ3 517 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 HJURPQ8NCD3 748 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-214ENST00000580073 BAHD1Q8TBE0 780 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-214ENST00000580073 SORCS1Q8WY21 1168 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 TATDN2Q93075 761 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 TMEM245Q9H330 911 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 ABCB8Q9NUT2 735 aa13.9□□□□□ -0.18
TRAF4-214ENST00000580073 RALYQ9UKM9 306 aaKnown RBP13.9□□□□□ -0.18
TRAF4-214ENST00000580073 FNDC3AQ9Y2H6 1198 aaKnown RBP13.9□□□□□ -0.18
TRAF4-214ENST00000580073 YKT6O15498 198 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 PCDHGA12O60330 932 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 FBXO21O94952 628 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 LETM1O95202 739 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-214ENST00000580073 MOCS3O95396 460 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 GNA14O95837 355 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 CD27P26842 260 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 MBLAC2Q68D91 279 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 MFN1Q8IWA4 741 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 SERPINB11Q96P15 392 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 NT5C1BQ96P26 610 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 ACE2Q9BYF1 805 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-214ENST00000580073 C6orf106Q9H6K1 298 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-214ENST00000580073 DKK4Q9UBT3 224 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 SFMBT1Q9UHJ3 866 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 SPEGQ15772 3267 aa13.89□□□□□ -0.19
TRAF4-214ENST00000580073 ANKRD11Q6UB99 2663 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms