RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 E9PAM4 449 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 F5H5T6 163 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 CHADO15335 359 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 DDX3YO15523 660 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 BMP1P13497 986 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 GDI1P31150 447 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 VCPP55072 806 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 CDH6P55285 790 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 GNG11P61952 73 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 PDGFRLQ15198 375 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 C5orf22Q49AR2 442 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 MANEALQ5VSG8 457 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 TRIM68Q6AZZ1 485 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 FBXL22Q6P050 247 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 RFWD3Q6PCD5 774 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 UBL4BQ8N7F7 174 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 RAPGEF5Q92565 580 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 MYEOVQ96EZ4 313 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 PRICKLE1Q96MT3 831 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 ASB2Q96Q27 587 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 PCDH18Q9HCL0 1135 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 COL4A3Q01955 1670 aa16.43■□□□□ 0.22
CSNK1D-212ENST00000580061 COL4A2P08572 1712 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 IGLV3-10A0A075B6K4 115 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 DRGXA6NNA5 263 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 CREB3O43889 395 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 LRIG2O94898 1065 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 KRT1P04264 644 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 CD48P09326 243 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 KDELR1P24390 212 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 ZNF135P52742 658 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 RWDD2BP57060 319 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 KRT81Q14533 505 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 PDK2Q15119 407 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 RPS6KA1Q15418 735 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 PPP6R3Q5H9R7 873 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 ZFYVE27Q5T4F4 411 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 LRRC31Q6UY01 552 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 NYAP1Q6ZVC0 841 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 LGI2Q8N0V4 545 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 SLC44A3Q8N4M1 653 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 KCTD6Q8NC69 237 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 TSC1Q92574 1164 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 ALG3Q92685 438 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 IRF7Q92985 503 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 IGSF8Q969P0 613 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 EPAS1Q99814 870 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 HPS4Q9NQG7 708 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 SPHK2Q9NRA0 654 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 NEU3Q9UQ49 428 aa16.42■□□□□ 0.22
CSNK1D-212ENST00000580061 C19orf67A6NJJ6 358 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 C3orf70A6NLC5 250 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 PI4K2BG5E9Z4 385 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 ARNTLO00327 626 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 ENC1O14682 589 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 TSPAN3O60637 253 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 SRGAP2O75044 1071 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 ZRANB2O95218 330 aaKnown RBP eCLIP16.41■□□□□ 0.226e-6■■■■□ 21
CSNK1D-212ENST00000580061 NFATC1O95644 943 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 ASGR2P07307 311 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 ARSAP15289 507 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 GOT1P17174 413 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 IL4RP24394 825 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 HOXC13P31276 330 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 HTR7P34969 479 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 SGSHP51688 502 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 DPYSL3Q14195 570 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 MPPE1Q53F39 396 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 RABGAP1LQ5R372 815 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 LY6G5CQ5SRR4 150 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 RHBDF2Q6PJF5 856 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 TPGS1Q6ZTW0 290 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 TMEM25Q86YD3 366 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 MAP7D3Q8IWC1 876 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 CFAP52Q8N1V2 620 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 EXD1Q8NHP7 514 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 ATP2A3Q93084 1043 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 RNF25Q96BH1 459 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 TBC1D31Q96DN5 1066 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 TMA16Q96EY4 203 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 P2RY11Q96G91 374 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 RPRD1AQ96P16 312 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 WDR24Q96S15 920 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 EBF3Q9H4W6 596 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 CWC15Q9P013 229 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 MARK1Q9P0L2 795 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 RCOR3Q9P2K3 495 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 PPARGC1AQ9UBK2 798 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 MIA3Q5JRA6 1907 aa16.41■□□□□ 0.22
CSNK1D-212ENST00000580061 LRRD1A4D1F6 860 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 H3BRJ5 948 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 EEF2KO00418 725 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 CYP17A1P05093 508 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 ARL4AP40617 200 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 HCAR3P49019 387 aa16.4■□□□□ 0.22
CSNK1D-212ENST00000580061 DNA2P51530 1060 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms