RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 RCCD1A6NED2 376 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 TMEM110-MUSTN1A8MSY1 372 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 I6L893 689 aaPredicted RBP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 M0R296 226 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 CACNG3O60359 315 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 SRGAP2O75044 1071 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 MAN1A1P33908 653 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 OPRD1P41143 372 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 SLC6A11P48066 632 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 NRG1Q02297 640 aaPredicted RBP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 SCAPQ12770 1279 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 GRSF1Q12849 480 aaKnown RBP eCLIP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 PON2Q15165 354 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 GAB4Q2WGN9 574 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 TTC39BQ5VTQ0 682 aaPredicted RBP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 NUDT18Q6ZVK8 323 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 C14orf80Q86SX3 495 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 PSTKQ8IV42 348 aaKnown RBP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 SUGP1Q8IWZ8 645 aaKnown RBP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 ZNF557Q8N988 423 aaPredicted RBP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 PPP1R9BQ96SB3 815 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 PNKPQ96T60 521 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 P2RY13Q9BPV8 354 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 LACRTQ9GZZ8 138 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 EPHX3Q9H6B9 360 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 DNAJC17Q9NVM6 304 aaKnown RBP16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 FBXO10Q9UK96 956 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 VANGL2Q9ULK5 521 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 SNX10Q9Y5X0 201 aa16.08■□□□□ 0.16
SLC6A4-205ENST00000579221 DRGXA6NNA5 263 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 E9PAM4 449 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 TULP3O75386 442 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 CD72P21854 359 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 L1CAMP32004 1257 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 SLC1A1P43005 524 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 SGSHP51688 502 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 RPS24P62847 133 aaKnown RBP16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 C5orf22Q49AR2 442 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 ETFBKMTQ8IXQ9 262 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 CFAP52Q8N1V2 620 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 IGSF8Q969P0 613 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 CHFRQ96EP1 664 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 MYEOVQ96EZ4 313 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 PRICKLE1Q96MT3 831 aaPredicted RBP16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 TSGA10Q9BZW7 698 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 TBC1D17Q9HA65 648 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 PPARGC1AQ9UBK2 798 aaKnown RBP16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 DUSP10Q9Y6W6 482 aa16.07■□□□□ 0.16
SLC6A4-205ENST00000579221 SHISA7A6NL88 538 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 FAM170BA6NMN3 283 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 NCAM2O15394 837 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 APODP05090 189 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 CCDC175P0C221 793 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 DRD1P21728 446 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 HOXD9P28356 352 aaPredicted RBP16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 GGCXP38435 758 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 DGKGP49619 791 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 UBXN2BQ14CS0 331 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 TMEM196Q5HYL7 178 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 GRAMD4Q6IC98 578 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 TXNDC11Q6PKC3 985 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 C12orf40Q86WS4 652 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 ZNF683Q8IZ20 524 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 CARNMT1Q8N4J0 409 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 FLCNQ8NFG4 579 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 TEKT4Q8WW24 435 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 PEBP4Q96S96 227 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 SNRNP25Q9BV90 132 aaKnown RBP16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 OSBPL6Q9BZF3 934 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 DHX35Q9H5Z1 703 aaKnown RBP16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 RETREG1Q9H6L5 497 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 ZWILCHQ9H900 591 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 ARHGEF4Q9NR80 690 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 NDRG2Q9UN36 371 aaKnown RBP16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 AP4E1Q9UPM8 1137 aa16.06■□□□□ 0.16
SLC6A4-205ENST00000579221 KIF26AQ9ULI4 1882 aaPredicted RBP16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 IGLV3-10A0A075B6K4 115 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 A0A0A0MRY4 1105 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 TBC1D3BA6NDS4 549 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 H0Y626 953 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 BUB1O43683 1085 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 KRT86O43790 486 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 BUB1BO60566 1050 aaPredicted RBP16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 CLDN11O75508 207 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 LUC7L3O95232 432 aaKnown RBP16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 KRT7P08729 469 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 CISD3P0C7P0 127 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 IL1R2P27930 398 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 HTR7P34969 479 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 GRIA2P42262 883 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 ZNF135P52742 658 aaPredicted RBP16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 CDH4P55283 916 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 OXCT1P55809 520 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 ZNF177Q13360 481 aaPredicted RBP16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 DAB2IPQ5VWQ8 1189 aa16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 RWDD4Q6NW29 188 aaKnown RBP16.05■□□□□ 0.16
SLC6A4-205ENST00000579221 MFN1Q8IWA4 741 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms