RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HOXD9P28356 352 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 SDC4P31431 198 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 SLC6A4P31645 630 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 CDH5P33151 784 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 NNMTP40261 264 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 DHPSP49366 369 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 OXCT1P55809 520 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 RPS24P62847 133 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 NOMO3P69849 1222 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 PITX1P78337 314 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 FMO1Q01740 532 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 KLHL30Q0D2K2 578 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 SPEM2Q0P670 501 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF177Q13360 481 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 AUHQ13825 339 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 NR1I3Q14994 352 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 EIF4HQ15056 248 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 NFKBIBQ15653 356 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 CLEC16AQ2KHT3 1053 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 ARL13BQ3SXY8 428 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 FAM133BQ5BKY9 247 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 MS4A13Q5J8X5 152 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 MBLAC2Q68D91 279 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 NADSYN1Q6IA69 706 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 PPP1R2P3Q6NXS1 205 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 DNAJC24Q6P3W2 148 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 DCUN1D2Q6PH85 259 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 KIAA1324Q6UXG2 1013 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 APTXQ7Z2E3 356 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 KBTBD6Q86V97 674 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 C11orf74Q86VG3 221 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 VPS36Q86VN1 386 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 FAM217AQ8IXS0 508 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 AHI1Q8N157 1196 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 FAM160A2Q8N612 972 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 SUMF1Q8NBK3 374 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 MDGA1Q8NFP4 955 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 FIBINQ8TAL6 211 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 GANCQ8TET4 914 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 WFIKKN2Q8TEU8 576 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 RLN3Q8WXF3 142 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 SORCS1Q8WY21 1168 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 C11orf70Q9BRQ4 267 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 NUP58Q9BVL2 599 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 SELENOOQ9BVL4 669 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 TKTL2Q9H0I9 626 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 NUCKS1Q9H1E3 243 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 METTL5Q9NRN9 209 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 IFNKQ9P0W0 207 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 KIAA1522Q9P206 1035 aaPredicted RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 XPO7Q9UIA9 1087 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 FBXO10Q9UK96 956 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 VANGL2Q9ULK5 521 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 CLEC4EQ9ULY5 219 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 MYO6Q9UM54 1294 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 LUC7L2Q9Y383 392 aaKnown RBP6.78□□□□□ -1.32
TRAF4-213ENST00000578917 RAD54BQ9Y620 910 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 TICRRQ7Z2Z1 1910 aa6.78□□□□□ -1.32
TRAF4-213ENST00000578917 RNASEH1O60930 286 aaKnown RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 NDUFS2O75306 463 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF217O75362 1048 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 LUC7L3O95232 432 aaKnown RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 ADCY5O95622 1261 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CYP1A1P04798 512 aaPredicted RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 TPM1P09493 284 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 DLDP09622 509 aaKnown RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 HNRNPLP14866 589 aaKnown RBP eCLIP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 HLA-FP30511 346 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CD70P32970 193 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 SCNN1AP37088 669 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CXCR3P49682 368 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 SGSHP51688 502 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CREB5Q02930 508 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 ZNF234Q14588 700 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CDO1Q16878 200 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 ACCSLQ4AC99 568 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 TDRD12Q587J7 1177 aaKnown RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 BRMS1LQ5PSV4 323 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 ACBD5Q5T8D3 534 aaPredicted RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 TTC39BQ5VTQ0 682 aaPredicted RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 ACAD10Q6JQN1 1059 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 RWDD4Q6NW29 188 aaKnown RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 FBXL22Q6P050 247 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 SCYL2Q6P3W7 929 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 LPCAT2Q7L5N7 544 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 IRF2BP2Q7Z5L9 587 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 FAM131BQ86XD5 332 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CCAR2Q8N163 923 aaKnown RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 EMC1Q8N766 993 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 C12orf50Q8NA57 414 aaPredicted RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 RNF214Q8ND24 703 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CYB5D2Q8WUJ1 264 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 RXFP2Q8WXD0 754 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 PRCCQ92733 491 aaPredicted RBP6.77□□□□□ -1.33
TRAF4-213ENST00000578917 CFAP57Q96MR6 1250 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 PCDHB18PQ96TA0 734 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 TBCBQ99426 244 aa6.77□□□□□ -1.33
TRAF4-213ENST00000578917 NPY6RQ99463 290 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms