RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 EML3Q32P44 896 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 FAM72AQ5TYM5 149 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 LRRC38Q5VT99 294 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 FAM72DQ6L9T8 149 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 RWDD4Q6NW29 188 aaKnown RBP12.54□□□□□ -0.4
IFT20-207ENST00000578547 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 POLNQ7Z5Q5 900 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 ZSCAN30Q86W11 494 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 FAM72BQ86X60 149 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 PSTKQ8IV42 348 aaKnown RBP12.54□□□□□ -0.4
IFT20-207ENST00000578547 CFAP52Q8N1V2 620 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 UBL4BQ8N7F7 174 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 KCTD6Q8NC69 237 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 CD101Q93033 1021 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 ATP2A3Q93084 1043 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 AZIN2Q96A70 460 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 RNF25Q96BH1 459 aaPredicted RBP12.54□□□□□ -0.4
IFT20-207ENST00000578547 OTUB2Q96DC9 234 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 MYEOVQ96EZ4 313 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 EPAS1Q99814 870 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 CALN1Q9BXU9 219 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 OSBPL2Q9H1P3 480 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 BRD9Q9H8M2 597 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 DDX56Q9NY93 547 aaKnown RBP12.54□□□□□ -0.4
IFT20-207ENST00000578547 STIM2Q9P246 746 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 UNC80Q8N2C7 3258 aa12.54□□□□□ -0.4
IFT20-207ENST00000578547 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
IFT20-207ENST00000578547 CCDC66A2RUB6 948 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 TYW5A2RUC4 315 aaKnown RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 MIF4GDA9UHW6 222 aaKnown RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 NEDD8-MDP1E9PL57 170 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 H3BRJ5 948 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 ENC1O14682 589 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CHADO15335 359 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 NARSO43776 548 aaKnown RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 TBL1XO60907 577 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 LRIG2O94898 1065 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 NFATC1O95644 943 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CYBBP04839 570 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CYP17A1P05093 508 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CD48P09326 243 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CTNNA2P26232 953 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 L1CAMP32004 1257 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 IRAK1P51617 712 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 TPI1P60174 286 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 RPS24P62847 133 aaKnown RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 TDGQ13569 410 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 RPS6KA1Q15418 735 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 ANO4Q32M45 955 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 RABGAP1LQ5R372 815 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 LY6G5CQ5SRR4 150 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 MEI1Q5TIA1 1274 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 FBXL22Q6P050 247 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CCDC50Q8IVM0 306 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 FAM217AQ8IXS0 508 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CPXM2Q8N436 756 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 CPA6Q8N4T0 437 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 HJURPQ8NCD3 748 aaPredicted RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 RAPGEF5Q92565 580 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 ALG3Q92685 438 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 IGSF8Q969P0 613 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 TBC1D31Q96DN5 1066 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 C1orf74Q96LT6 269 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 C16orf45Q96MC5 204 aaPredicted RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 UHRF1Q96T88 793 aaPredicted RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 PSMB7Q99436 277 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 PRMT1Q99873 361 aaKnown RBP12.53□□□□□ -0.4
IFT20-207ENST00000578547 FAM83CQ9BQN1 747 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 BBS2Q9BXC9 721 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 PCDH18Q9HCL0 1135 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 HPS4Q9NQG7 708 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 SPHK2Q9NRA0 654 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 PLK2Q9NYY3 685 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 PCDHA3Q9Y5H8 950 aa12.53□□□□□ -0.4
IFT20-207ENST00000578547 DDX3YO15523 660 aaKnown RBP12.52□□□□□ -0.41
IFT20-207ENST00000578547 DAPK3O43293 454 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 SLC34A2O95436 690 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 ADH1CP00326 375 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 ADH5P11766 374 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 GOT1P17174 413 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 EPHB2P29323 1055 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 ARL4AP40617 200 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 RWDD2BP57060 319 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 SEMA3BQ13214 749 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 ZNF211Q13398 564 aaPredicted RBP12.52□□□□□ -0.41
IFT20-207ENST00000578547 DPYSL3Q14195 570 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 LLGL1Q15334 1064 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 DHCR24Q15392 516 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 ACBD5Q5T8D3 534 aaPredicted RBP12.52□□□□□ -0.41
IFT20-207ENST00000578547 TFAP2DQ7Z6R9 452 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 KATNAL2Q8IYT4 538 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 ADGRG2Q8IZP9 1017 aa12.52□□□□□ -0.41
IFT20-207ENST00000578547 KIAA1958Q8N8K9 716 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms