RNA–Protein interactions for RNA: ENST00000578340.4

AC116003.1-201, humanhuman

TSL 3 BASIC

Gene AC116003.1, Length 536 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.1-201ENST00000578340 HLA-EP13747 358 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 CDK11BP21127 795 aaKnown RBP16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 JAM2P57087 298 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 ARID5AQ03989 594 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 CAVIN1Q6NZI2 390 aaKnown RBP16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 ARMCX6Q7L4S7 300 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 SLC26A9Q7LBE3 791 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 APTXQ7Z2E3 356 aaKnown RBP16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 MFN1Q8IWA4 741 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 LGI2Q8N0V4 545 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 CARNMT1Q8N4J0 409 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 DEFB119Q8N690 84 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 WFIKKN2Q8TEU8 576 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 ADAM33Q9BZ11 813 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 IRX2Q9BZI1 471 aaPredicted RBP16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 CDV3Q9UKY7 258 aaKnown RBP16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 CYP8B1Q9UNU6 501 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 CACNA1AO00555 2505 aa16.67■□□□□ 0.26
AC116003.1-201ENST00000578340 SPTBN2O15020 2390 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 NPC1O15118 1278 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 ZBTB24O43167 697 aaPredicted RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 TIMM44O43615 452 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 CAVIN2O95810 425 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 TFE3P19532 575 aaPredicted RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 TACR2P21452 398 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 PTGER3P43115 390 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 ATXN1P54253 815 aaKnown RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 SNX16P57768 344 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 RNASE9P60153 205 aaKnown RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 UBXN1Q04323 297 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 LMAN2Q12907 356 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 NME3Q13232 169 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 BYSLQ13895 437 aaKnown RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 STARD3Q14849 445 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 AASDHQ4L235 1098 aaPredicted RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 OTUD1Q5VV17 481 aaPredicted RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 MBLAC2Q68D91 279 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 KIAA1324Q6UXG2 1013 aaKnown RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 SERPINA13PQ6UXR4 307 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 MMS22LQ6ZRQ5 1243 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 LPCAT2Q7L5N7 544 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 CHSY1Q86X52 802 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 ERICH1Q86X53 443 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 XYLT1Q86Y38 959 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 AHI1Q8N157 1196 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 ZNF366Q8N895 744 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 ANKRD20A12PQ8NF67 263 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 ZNF397Q8NF99 534 aaPredicted RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 CPA5Q8WXQ8 436 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 LMLNQ96KR4 655 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 BTN2A3PQ96KV6 586 aa16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 PCMTD1Q96MG8 357 aaPredicted RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 MKRN2Q9H000 416 aaKnown RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 NOCTQ9UK39 431 aaKnown RBP16.66■□□□□ 0.26
AC116003.1-201ENST00000578340 IGHV1OR15-9A0A0B4J2B8 117 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 TYW5A2RUC4 315 aaKnown RBP16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 LRRC10BA6NIK2 292 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 KCNU1A8MYU2 1149 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 EPHX1P07099 455 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 CHRNB2P17787 502 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 NOS2P35228 1153 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 SOX5P35711 763 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 GABRB2P47870 512 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 NOMO3P69849 1222 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 NUMA1Q14980 2115 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 PTPRNQ16849 979 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 FNDC3BQ53EP0 1204 aaKnown RBP16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 FSCBQ5H9T9 825 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 NAA35Q5VZE5 725 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 DGLUCYQ7Z3D6 616 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 CYP2U1Q7Z449 544 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 ATP6V0D2Q8N8Y2 350 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 C12orf50Q8NA57 414 aaPredicted RBP16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 FIBINQ8TAL6 211 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 RNF34Q969K3 372 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 C18orf8Q96DM3 657 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 PRMT1Q99873 361 aaKnown RBP16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 VPS45Q9NRW7 570 aa16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 INTS6Q9UL03 887 aaKnown RBP16.65■□□□□ 0.26
AC116003.1-201ENST00000578340 ADAMTS9Q9P2N4 1935 aa16.64■□□□□ 0.26
AC116003.1-201ENST00000578340 PATE3B3GLJ2 98 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 M0QYT0 321 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 SYNCRIPO60506 623 aaKnown RBP16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 LUC7L3O95232 432 aaKnown RBP16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 LSM8O95777 96 aaKnown RBP16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 POLR2EP19388 210 aaKnown RBP16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 CCR1P32246 355 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 MATKP42679 507 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 COPAP53621 1224 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 FMO1Q01740 532 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 RPL6Q02878 288 aaKnown RBP16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 CDH18Q13634 790 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 FAM102AQ5T9C2 384 aaPredicted RBP16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 CIR1Q86X95 450 aaPredicted RBP16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 CACUL1Q86Y37 369 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 TMPRSS6Q8IU80 811 aa16.64■□□□□ 0.25
AC116003.1-201ENST00000578340 ZDHHC17Q8IUH5 632 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms