RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 ADCY5O95622 1261 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 FAM228BP0C875 321 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 ADKP55263 362 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 RPS24P62847 133 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 CSTF1Q05048 431 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 TCF15Q12870 199 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 MAMLD1Q13495 774 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 CDH18Q13634 790 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 GAS6Q14393 721 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 EIF4HQ15056 248 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 C15orf59Q2T9L4 293 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 ZNF528Q3MIS6 628 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 C2orf27AQ580R0 203 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 EOGTQ5NDL2 527 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 ALKBH5Q6P6C2 394 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 SYT13Q7L8C5 426 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 BNIPLQ7Z465 357 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 FAM172AQ8WUF8 416 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 RPRD1AQ96P16 312 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 HAPLN3Q96S86 360 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 CNPY3Q9BT09 278 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 FAM126AQ9BYI3 521 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 MYO1AQ9UBC5 1043 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 STARD13Q9Y3M8 1113 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 MUC3AQ02505 3323 aa13.12□□□□□ -0.31
CSNK1D-207ENST00000578194 A0A1B0GVM2 712 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 TCAF2A6NFQ2 919 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 H0Y626 953 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 H0Y858 1186 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 NPC1O15118 1278 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 TRIM24O15164 1050 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 CCP110O43303 1012 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 TIMM44O43615 452 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 AKR1B10O60218 316 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 LUC7L3O95232 432 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 KLF8O95600 359 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 SP9P0CG40 484 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 TIE1P35590 1138 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 KIR2DL1P43626 348 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 SGSHP51688 502 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 NRLP54845 237 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 OXCT1P55809 520 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 RPL7AP62424 266 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 SATB1Q01826 763 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 MESP2Q0VG99 397 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 AUHQ13825 339 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 DMC1Q14565 340 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 RNF43Q68DV7 783 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 FBXL22Q6P050 247 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 AHI1Q8N157 1196 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 CFAP52Q8N1V2 620 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 CARNMT1Q8N4J0 409 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■□□□□ 10.6
CSNK1D-207ENST00000578194 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 FIBINQ8TAL6 211 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 ATOH1Q92858 354 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 CCDC42Q96M95 316 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 NCAPGQ9BPX3 1015 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 GGA2Q9UJY4 613 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 VANGL2Q9ULK5 521 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 MMP17Q9ULZ9 603 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 HS3ST4Q9Y661 456 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 FANCMQ8IYD8 2048 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 DOCK4Q8N1I0 1966 aa13.11□□□□□ -0.31
CSNK1D-207ENST00000578194 TMEM191CA6NGB0 347 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 PRRT4C9JH25 899 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 MOCS3O95396 460 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 PABPC1P11940 636 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 PSMA2P25787 234 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 ATXN1P54253 815 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 HDAC4P56524 1084 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 GEN1Q17RS7 908 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 EMC10Q5UCC4 262 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 PKN3Q6P5Z2 889 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 ZC3H14Q6PJT7 736 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 SFTPA1Q8IWL2 248 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 MAML2Q8IZL2 1156 aaPredicted RBP13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 CAMKK1Q8N5S9 505 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 ALLCQ8N6M5 410 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 IL17RCQ8NAC3 791 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 TXNDC5Q8NBS9 432 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 FNIP1Q8TF40 1166 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 NTAN1Q96AB6 310 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 P2RY11Q96G91 374 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 CIPCQ9C0C6 399 aa13.1□□□□□ -0.31
CSNK1D-207ENST00000578194 ABCB8Q9NUT2 735 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms