RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 PSMD12O00232 456 aaPredicted RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 PLA2G6O60733 806 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ACO1P21399 889 aaKnown RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 PPP2R1BP30154 601 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TSNQ15631 228 aaKnown RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 STYK1Q6J9G0 422 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ABRAXAS1Q6UWZ7 409 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 BBS12Q6ZW61 710 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TXNRD3Q86VQ6 643 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 RPRD1AQ96P16 312 aaPredicted RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TRPC7Q9HCX4 862 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 PRG3Q9Y2Y8 225 aaPredicted RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 SQORQ9Y6N5 450 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 MGAT4DA6NG13 374 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TMEM191CA6NGB0 347 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 F5H5T6 163 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 CCDC130P13994 396 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ANPEPP15144 967 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ADSSP30520 456 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 EIF2B5Q13144 721 aaKnown RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 NFIL3Q16649 462 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TCHHL1Q5QJ38 904 aaPredicted RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ZFP42Q96MM3 310 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 KLHL28Q9NXS3 571 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 RGSL1A5PLK6 1076 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ALOX15BO15296 676 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 EGFRP00533 1210 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ARP10275 920 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TNK2Q07912 1038 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 SQLEQ14534 574 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 MIIPQ5JXC2 388 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 PDZK1Q5T2W1 519 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 TDRD10Q5VZ19 366 aaKnown RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 CDK5RAP1Q96SZ6 601 aaKnown RBP10.97□□□□□ -0.65
SEC22B-201ENST00000578049 PDCD2LQ9BRP1 358 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 FICDQ9BVA6 458 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 IL22Q9GZX6 179 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 CHST7Q9NS84 486 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 ADPRHL2Q9NX46 363 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 POLIQ9UNA4 740 aa10.97□□□□□ -0.65
SEC22B-201ENST00000578049 A0A087X0B3 334 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 HDAC3O15379 428 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 SERPINF2P08697 491 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 NUP62P37198 522 aaPredicted RBP10.96□□□□□ -0.65
SEC22B-201ENST00000578049 POLD3Q15054 466 aaPredicted RBP10.96□□□□□ -0.65
SEC22B-201ENST00000578049 GALNTL6Q49A17 601 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 INO80DQ53TQ3 878 aaPredicted RBP10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ACOT1Q86TX2 421 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ADCY4Q8NFM4 1077 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 KBTBD8Q8NFY9 601 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 FAM163AQ96GL9 167 aaPredicted RBP10.96□□□□□ -0.65
SEC22B-201ENST00000578049 RTFDC1Q9BY42 306 aaPredicted RBP10.96□□□□□ -0.65
SEC22B-201ENST00000578049 AGO4Q9HCK5 861 aaKnown RBP10.96□□□□□ -0.65
SEC22B-201ENST00000578049 BTBD3Q9Y2F9 522 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 KLRC4O43908 158 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 NPTXRO95502 500 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ZNF682O95780 498 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 LBPP18428 481 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 BMT2Q1RMZ1 405 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 TSHZ1Q6ZSZ6 1077 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 FAM71AQ8IYT1 594 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 LEMD2Q8NC56 503 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ENKURQ8TC29 256 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 RNFT2Q96EX2 444 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 DCUN1D5Q9BTE7 237 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ENTPD7Q9NQZ7 604 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 AHSPQ9NZD4 102 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 TMEM216Q9P0N5 145 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 CDH9Q9ULB4 789 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 DMTF1Q9Y222 760 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ADGRB2O60241 1585 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 PCSK2P16519 638 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 CAP2P40123 477 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 KCNJ2P63252 427 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ACVR2BQ13705 512 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 TRABD2AQ86V40 505 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 FAM131BQ86XD5 332 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 LRRC49Q8IUZ0 686 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 RASGEF1CQ8N431 466 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 LRRC71Q8N4P6 559 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 DNERQ8NFT8 737 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 SHC3Q92529 594 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ATG4CQ96DT6 458 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 CYP4F12Q9HCS2 524 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 GPRC5CQ9NQ84 441 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ARMCX1Q9P291 453 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 MCM8Q9UJA3 840 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 TSR3Q9UJK0 312 aaKnown RBP10.96□□□□□ -0.65
SEC22B-201ENST00000578049 SPACA6W5XKT8 324 aa10.96□□□□□ -0.65
SEC22B-201ENST00000578049 ROBO3Q96MS0 1386 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 RAD51BO15315 384 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 ASMTLO95671 621 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 STAG3L1P0CL83 205 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 ALLCQ8N6M5 410 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 ITFG1Q8TB96 612 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 ACTR8Q9H981 624 aa10.96□□□□□ -0.66
SEC22B-201ENST00000578049 TPP2P29144 1249 aaPredicted RBP10.96□□□□□ -0.66
SEC22B-201ENST00000578049 RPA3P35244 121 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms