RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 CEBPBP17676 345 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MX2P20592 715 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 TACR2P21452 398 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CCR2P41597 374 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MAPKAPK2P49137 400 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 KCNQ1P51787 676 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 C2orf54Q08AI8 447 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 USP4Q13107 963 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 COL19A1Q14993 1142 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 SLC5A9Q2M3M2 681 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ADGRF1Q5T601 910 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 PIK3R6Q5UE93 754 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 RAP1GAP2Q684P5 730 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MAATS1Q7Z4T9 603 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 DENND1CQ8IV53 801 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CDKL3Q8IVW4 592 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CCDC117Q8IWD4 279 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 PYROXD2Q8N2H3 581 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MMGT1Q8N4V1 131 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 C12orf76Q8N812 135 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ZNF557Q8N988 423 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 HJURPQ8NCD3 748 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 PCDH19Q8TAB3 1148 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CCHCR1Q8TD31 782 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 RUBCNQ92622 972 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MAGOHBQ96A72 148 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 OTUB2Q96DC9 234 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ZFRQ96KR1 1074 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 RPRD1AQ96P16 312 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 AP1M1Q9BXS5 423 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 SLC46A2Q9BY10 475 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 BRD8Q9H0E9 1235 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 LRRC19Q9H756 370 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 RBM12Q9NTZ6 932 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CFAP97Q9P2B7 532 aa13.7□□□□□ -0.22
CDK5RAP3-205ENST00000577802 C2orf16Q68DN1 1984 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 IGLV3-10A0A075B6K4 115 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 LEFTY2O00292 366 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 PDE2AO00408 941 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 NDC80O14777 642 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MOSPD3O75425 235 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CYBBP04839 570 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 GJA1P17302 382 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 NTHL1P78549 312 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 RBM10P98175 930 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MMRN1Q13201 1228 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 XRCC4Q13426 336 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 AUHQ13825 339 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 BYSLQ13895 437 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 PAFAH1B3Q15102 231 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 NOMO1Q15155 1222 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CTC1Q2NKJ3 1217 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 NCBP2-AS2Q69YL0 99 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 SYCE2Q6PIF2 218 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 SYDE1Q6ZW31 735 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 HTR3DQ70Z44 454 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CHST9Q7L1S5 443 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 GET4Q7L5D6 327 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ADAT2Q7Z6V5 191 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CCDC105Q8IYK2 499 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CPXM2Q8N436 756 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CELF5Q8N6W0 485 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 RTL3Q8N8U3 475 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 SH3RF2Q8TEC5 729 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 UBXN4Q92575 508 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 TCEAL4Q96EI5 215 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CCDC114Q96M63 670 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ANLNQ9NQW6 1124 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 TMPRSS4Q9NRS4 437 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 OBP2AQ9NY56 170 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 SMARCAL1Q9NZC9 954 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 AGO1Q9UL18 857 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 VANGL2Q9ULK5 521 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 DENND4AQ7Z401 1863 aa13.69□□□□□ -0.22
CDK5RAP3-205ENST00000577802 A0A1B0GVM2 712 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 TCAF2A6NFQ2 919 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 DCLK1O15075 740 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 LINC01565O15544 149 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MTSS1O43312 755 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 LIASO43766 372 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 TBX10O75333 385 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 CLDN11O75508 207 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 STK10O94804 968 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ECEL1O95672 775 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 TUBBP07437 444 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ERCC2P18074 760 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 IL4RP24394 825 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 MCM3P25205 808 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 ETFBP38117 255 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 VCPP55072 806 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 DR1Q01658 176 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 OTUD4Q01804 1114 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 PDK1Q15118 436 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 TEX35Q5T0J7 233 aa13.68□□□□□ -0.22
CDK5RAP3-205ENST00000577802 STXBP5Q5T5C0 1151 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms