RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 RNF8O76064 485 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 HAPLN1P10915 354 aaPredicted RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 PSMA2P25787 234 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 ADORA2BP29275 332 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 WEE1P30291 646 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 GJA4P35212 333 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 GABRB2P47870 512 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 SEC13P55735 322 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 GSCP56915 257 aaPredicted RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 ACAP1Q15027 740 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 PTPN20Q4JDL3 420 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 USP39Q53GS9 565 aaKnown RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 PPP1R26Q5T8A7 1209 aaPredicted RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 FAM102AQ5T9C2 384 aaPredicted RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 OR6B2Q6IFH4 312 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 LIMS2Q7Z4I7 341 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 MAATS1Q7Z4T9 603 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 CCDC50Q8IVM0 306 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 C12orf29Q8N999 325 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 NOA1Q8NC60 698 aaKnown RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 B3GALNT2Q8NCR0 500 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 DEFB124Q8NES8 71 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 RIN3Q8TB24 985 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 KBTBD7Q8WVZ9 684 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 PIGKQ92643 395 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 CD101Q93033 1021 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 EXOC4Q96A65 974 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 RBM41Q96IZ5 413 aaKnown RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 BTBD6Q96KE9 485 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 RUNDC3BQ96NL0 473 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 CPXM1Q96SM3 734 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 SCNM1Q9BWG6 230 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 PARD6BQ9BYG5 372 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 ADAM33Q9BZ11 813 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 ECT2Q9H8V3 914 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 ARFGAP3Q9NP61 516 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 TMEM9BQ9NQ34 198 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 ASNSD1Q9NWL6 643 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 DUS2Q9NX74 493 aaKnown RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 DDX43Q9NXZ2 648 aaKnown RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 DDX56Q9NY93 547 aaKnown RBP10.57□□□□□ -0.72
SS18-207ENST00000577636 CHD8Q9HCK8 2581 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 CITO14578 2027 aa10.57□□□□□ -0.72
SS18-207ENST00000577636 LNP1A1A4G5 178 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 CCDC151A5D8V7 595 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 ZRANB2O95218 330 aaKnown RBP eCLIP10.56□□□□□ -0.72
SS18-207ENST00000577636 F11P03951 625 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 ERBB2P04626 1255 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 KRT7P08729 469 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 PTPN1P18031 435 aaKnown RBP10.56□□□□□ -0.72
SS18-207ENST00000577636 IFNAR2P48551 515 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 DHPSP49366 369 aaPredicted RBP10.56□□□□□ -0.72
SS18-207ENST00000577636 PEX5P50542 639 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 IRX4P78413 519 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 PDGFRLQ15198 375 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 MAPRE1Q15691 268 aaKnown RBP10.56□□□□□ -0.72
SS18-207ENST00000577636 FBXO43Q4G163 708 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 C2orf27AQ580R0 203 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 LRRC38Q5VT99 294 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 WSCD1Q658N2 575 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 WDR93Q6P2C0 686 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 SYT13Q7L8C5 426 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 CYP2U1Q7Z449 544 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 TMEM150AQ86TG1 271 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 XYLT1Q86Y38 959 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 KLHL7Q8IXQ5 586 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 IFT20Q8IY31 132 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 DCP1BQ8IZD4 617 aaKnown RBP10.56□□□□□ -0.72
SS18-207ENST00000577636 CPA6Q8N4T0 437 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 NIPA2Q8N8Q9 360 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 KDF1Q8NAX2 398 aaPredicted RBP10.56□□□□□ -0.72
SS18-207ENST00000577636 TSTD1Q8NFU3 115 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 SPPL2BQ8TCT7 592 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 SLC2A14Q8TDB8 520 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 FNIP1Q8TF40 1166 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 CYP2S1Q96SQ9 504 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 KRT12Q99456 494 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 EHD2Q9NZN4 543 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 HSFX1Q9UBD0 423 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 RASAL2Q9UJF2 1139 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 CDH9Q9ULB4 789 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 WNT6Q9Y6F9 365 aa10.56□□□□□ -0.72
SS18-207ENST00000577636 ANK1P16157 1881 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 KIF26AQ9ULI4 1882 aaPredicted RBP10.55□□□□□ -0.72
SS18-207ENST00000577636 ANTXRLA6NF34 631 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 SRRM3A6NNA2 597 aaPredicted RBP10.55□□□□□ -0.72
SS18-207ENST00000577636 E5RJQ4 531 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 CDX4O14627 284 aaPredicted RBP10.55□□□□□ -0.72
SS18-207ENST00000577636 GABRDO14764 452 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 FAM200BP0CF97 657 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 CSH1P0DML2 217 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 CSH2P0DML3 217 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 CEACAM1P13688 526 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 CCDC130P13994 396 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 HMGA1P17096 107 aaKnown RBP10.55□□□□□ -0.72
SS18-207ENST00000577636 BCKDHBP21953 392 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 LMO2P25791 158 aa10.55□□□□□ -0.72
SS18-207ENST00000577636 DDX6P26196 483 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms