RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 FBXL12Q9NXK8 326 aa13.92□□□□□ -0.18
COPS3-214ENST00000577246 COL5A1P20908 1838 aaPredicted RBP13.92□□□□□ -0.18
COPS3-214ENST00000577246 CKAP5Q14008 2032 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.91□□□□□ -0.18
COPS3-214ENST00000577246 TYW5A2RUC4 315 aaKnown RBP13.91□□□□□ -0.18
COPS3-214ENST00000577246 IRAK2O43187 625 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 TLX3O43711 291 aaPredicted RBP13.91□□□□□ -0.18
COPS3-214ENST00000577246 ASLP04424 464 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 PLA2G2AP14555 144 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 CD38P28907 300 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 ACTN2P35609 894 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 STK4Q13043 487 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 KMT5BQ4FZB7 885 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 ZNF394Q53GI3 561 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 ARHGAP17Q68EM7 881 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
COPS3-214ENST00000577246 CACTIN-AS1Q8N1I8 211 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 ANKRD52Q8NB46 1076 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 OR2T34Q8NGX1 318 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 TAS1R2Q8TE23 839 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 TMEM176AQ96HP8 235 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 LRRC4Q9HBW1 653 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 FZD4Q9ULV1 537 aa13.91□□□□□ -0.18
COPS3-214ENST00000577246 PDIA4P13667 645 aaKnown RBP13.9□□□□□ -0.18
COPS3-214ENST00000577246 EPHA8P29322 1005 aaPredicted RBP13.9□□□□□ -0.18
COPS3-214ENST00000577246 GCLMP48507 274 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 SLC11A2P49281 568 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 CCR5P51681 352 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 GALCP54803 685 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 DNAJC3Q13217 504 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 FBXL19Q6PCT2 694 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 NCEH1Q6PIU2 408 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 UNC45BQ8IWX7 931 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 EID2Q8N6I1 236 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 KDM1BQ8NB78 822 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 KIAA0895Q8NCT3 520 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 OMDQ99983 421 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 ERVMER34-1Q9H9K5 563 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 TMEM8AQ9HCN3 771 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 ABCC13Q9NSE7 274 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 HESX1Q9UBX0 185 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 ADAMTS1Q9UHI8 967 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 RAI2Q9Y5P3 530 aa13.9□□□□□ -0.18
COPS3-214ENST00000577246 SETXQ7Z333 2677 aaKnown RBP13.9□□□□□ -0.18
COPS3-214ENST00000577246 XPO1O14980 1071 aaKnown RBP13.89□□□□□ -0.19
COPS3-214ENST00000577246 MAGEC1O60732 1142 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 RNASEH2AO75792 299 aaKnown RBP13.89□□□□□ -0.19
COPS3-214ENST00000577246 MYL1P05976 194 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 CKMT2P17540 419 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 NR2F2P24468 414 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 RPL13P26373 211 aaKnown RBP13.89□□□□□ -0.19
COPS3-214ENST00000577246 GTF2H1P32780 548 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 ME1P48163 572 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 ARID5BQ14865 1188 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 CST6Q15828 149 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 HNRNPA1L2Q32P51 320 aaKnown RBP13.89□□□□□ -0.19
COPS3-214ENST00000577246 C1orf220Q5T0J3 134 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 NUGGCQ68CJ6 796 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 KRT39Q6A163 491 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 MFN1Q8IWA4 741 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 SIX6OS1Q8N1H7 587 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 ZNF843Q8N446 348 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 TSC1Q92574 1164 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 SERAC1Q96JX3 654 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 DDX50Q9BQ39 737 aaKnown RBP13.89□□□□□ -0.19
COPS3-214ENST00000577246 ULBP1Q9BZM6 244 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 ASH1LQ9NR48 2969 aaKnown RBP13.89□□□□□ -0.19
COPS3-214ENST00000577246 CISHQ9NSE2 258 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 TRAF3IP3Q9Y228 551 aa13.89□□□□□ -0.19
COPS3-214ENST00000577246 HELZ2Q9BYK8 2649 aaKnown RBP13.88□□□□□ -0.19
COPS3-214ENST00000577246 A0A1W2PP55 124 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 TARSL2A2RTX5 802 aaKnown RBP13.88□□□□□ -0.19
COPS3-214ENST00000577246 ERVH48-1M5A8F1 160 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 KLRC4O43908 158 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 STX10O60499 249 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 TBL1XO60907 577 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 GLDCP23378 1020 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 CD70P32970 193 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 PSMC2P35998 433 aaKnown RBP13.88□□□□□ -0.19
COPS3-214ENST00000577246 NUDT1P36639 197 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 RAD23BP54727 409 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 UCNP55089 124 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 CFHR1Q03591 330 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 PPP3CAQ08209 521 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 BST2Q10589 180 aaKnown RBP13.88□□□□□ -0.19
COPS3-214ENST00000577246 NFIL3Q16649 462 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 PRAMEF14Q5SWL7 426 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 BROXQ5VW32 411 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 BSPRYQ5W0U4 402 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 RESP18Q5W5W9 173 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 SND1Q7KZF4 910 aaKnown RBP eCLIP13.88□□□□□ -0.19
COPS3-214ENST00000577246 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 SLC4A11Q8NBS3 891 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 HJURPQ8NCD3 748 aaPredicted RBP13.88□□□□□ -0.19
COPS3-214ENST00000577246 RFFLQ8WZ73 363 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
COPS3-214ENST00000577246 TTC17Q96AE7 1141 aa13.88□□□□□ -0.19
COPS3-214ENST00000577246 NEUROG2Q9H2A3 272 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms