RNA–Protein interactions for RNA: ENST00000576722.5

PITPNA-210, Transcript of phosphatidylinositol transfer protein alpha, human

TSL 3

Gene PITPNA, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PITPNA-210	ENST00000576722	ATXN1	P54253	815 aa	Known RBP	28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	TYRO3	Q06418	890 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	FNDC3B	Q53EP0	1204 aa	Known RBP	28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	RAP1GAP2	Q684P5	730 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	MBLAC2	Q68D91	279 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	ARMCX6	Q7L4S7	300 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	NOP9	Q86U38	636 aa	Known RBP	28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	CHSY1	Q86X52	802 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	CFAP52	Q8N1V2	620 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	CARNMT1	Q8N4J0	409 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	CYB5D2	Q8WUJ1	264 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	NLRC4	Q9NPP4	1024 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	CYP8B1	Q9UNU6	501 aa		28.72	■■■□□ 2.19
PITPNA-210	ENST00000576722	GFPT2	O94808	682 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	SLC2A3	P11169	496 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	POLR2E	P19388	210 aa	Known RBP	28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	ABCB4	P21439	1286 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	TACR2	P21452	398 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	PRKCH	P24723	683 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	CDH5	P33151	784 aa	Predicted RBP	28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	RPL6	Q02878	288 aa	Known RBP	28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	RNF43	Q68DV7	783 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	SLC36A4	Q6YBV0	504 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	SLC26A9	Q7LBE3	791 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	ADIPOR2	Q86V24	386 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	ERICH1	Q86X53	443 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	ZDHHC17	Q8IUH5	632 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	FIBIN	Q8TAL6	211 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	DDX1	Q92499	740 aa	Known RBP	28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	PIGK	Q92643	395 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	RTKN	Q9BST9	563 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	PRDM16	Q9HAZ2	1276 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	GON4L	Q3T8J9	2241 aa		28.71	■■■□□ 2.19
PITPNA-210	ENST00000576722	CACNA1A	O00555	2505 aa		28.7	■■■□□ 2.19
PITPNA-210	ENST00000576722	KCNU1	A8MYU2	1149 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	AP5Z1	O43299	807 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	DAB1	O75553	588 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	ATP5B	P06576	529 aa	Known RBP	28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	MME	P08473	750 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	CCR1	P32246	355 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	RNASE9	P60153	205 aa	Known RBP	28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	NME3	Q13232	169 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	EIF4EBP2	Q13542	120 aa	Predicted RBP	28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	SYCP1	Q15431	976 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	TCEAL6	Q6IPX3	200 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	DEFB119	Q8N690	84 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	AOPEP	Q8N6M6	819 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	TCEAL3	Q969E4	200 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	C18orf8	Q96DM3	657 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	SPAG5	Q96R06	1193 aa		28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	NAT10	Q9H0A0	1025 aa	Known RBP	28.7	■■■□□ 2.18
PITPNA-210	ENST00000576722	IGHV1OR15-9	A0A0B4J2B8	117 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	LSM8	O95777	96 aa	Known RBP	28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	HLA-E	P13747	358 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	NOS2	P35228	1153 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	PTGER3	P43115	390 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	UBXN1	Q04323	297 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	CDH18	Q13634	790 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	MSANTD4	Q8NCY6	345 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	ZNF397	Q8NF99	534 aa	Predicted RBP	28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	EPS8L1	Q8TE68	723 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	RXFP3	Q9NSD7	469 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	SIK3	Q9Y2K2	1263 aa		28.69	■■■□□ 2.18
PITPNA-210	ENST00000576722	DNAH14	Q0VDD8	3507 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	LGALS16	A8MUM7	142 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722		F5H5T6	163 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722		H0Y626	953 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	SLC30A4	O14863	429 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	EPHB6	O15197	1021 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	DLD	P09622	509 aa	Known RBP	28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	GABRB2	P47870	512 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	FOXK2	Q01167	660 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	LMAN2	Q12907	356 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	NCAPH	Q15003	741 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	ANO6	Q4KMQ2	910 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	SPDYC	Q5MJ68	293 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	LYSMD4	Q5XG99	296 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	NEK11	Q8NG66	645 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	MKRN2	Q9H000	416 aa	Known RBP	28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	CD93	Q9NPY3	652 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	DAAM1	Q9Y4D1	1078 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	CEP192	Q8TEP8	1941 aa		28.68	■■■□□ 2.18
PITPNA-210	ENST00000576722	DCDC2B	A2VCK2	349 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722		M0QYT0	321 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	LUC7L3	O95232	432 aa	Known RBP	28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	ZNF18	P17022	549 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	SOX5	P35711	763 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	MATK	P42679	507 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	FAM102A	Q5T9C2	384 aa	Predicted RBP	28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	CAVIN1	Q6NZI2	390 aa	Known RBP	28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	ZNF677	Q86XU0	584 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	TMPRSS6	Q8IU80	811 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	ZNF366	Q8N895	744 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	SLC20A1	Q8WUM9	679 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	CPA5	Q8WXQ8	436 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	SIPA1	Q96FS4	1042 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	28.67	■■■□□ 2.18	2e-11	■■■■□ 24.4
PITPNA-210	ENST00000576722	CKAP5	Q14008	2032 aa		28.67	■■■□□ 2.18
PITPNA-210	ENST00000576722	KHNYN	O15037	678 aa	Known RBP	28.66	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms