RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TMEM196Q5HYL7 178 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 DGKKQ5KSL6 1271 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 DNTTIP2Q5QJE6 756 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 FAM72AQ5TYM5 149 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 EGFLAMQ63HQ2 1017 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 TMEM215Q68D42 235 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 TXNRD3NBQ6F5E7 133 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PLEKHA7Q6IQ23 1121 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 FAM72DQ6L9T8 149 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ALKBH5Q6P6C2 394 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF852Q6ZMS4 543 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CYP4V2Q6ZWL3 525 aaPredicted RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 BEND5Q7L4P6 421 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 FAM72BQ86X60 149 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ZDHHC17Q8IUH5 632 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF683Q8IZ20 524 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 LGI2Q8N0V4 545 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PRSS33Q8NF86 280 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 KIF18AQ8NI77 898 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CD101Q93033 1021 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 RNF34Q969K3 372 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ACOX2Q99424 681 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 PRMT1Q99873 361 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 P2RY13Q9BPV8 354 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 TKTL2Q9H0I9 626 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 SIK2Q9H0K1 926 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 GOLPH3Q9H4A6 298 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 LMAN1LQ9HAT1 526 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 OSGEPQ9NPF4 335 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 DNAJC17Q9NVM6 304 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 KLHL11Q9NVR0 708 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ZNHIT6Q9NWK9 470 aaKnown RBP8.19□□□□□ -1.1
CCDC40-215ENST00000576033 ARHGEF38Q9NXL2 777 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 VANGL2Q9ULK5 521 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 CACNA1IQ9P0X4 2223 aa8.19□□□□□ -1.1
CCDC40-215ENST00000576033 SIGLEC16A6NMB1 481 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 TMEM110-MUSTN1A8MSY1 372 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 PJA2O43164 708 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 CACNG3O60359 315 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 APOEP02649 317 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 CISD3P0C7P0 127 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 CCDC172P0C7W6 258 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 COL9A1P20849 921 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 PSMA2P25787 234 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 IL1R2P27930 398 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 HLA-FP30511 346 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 AVPR2P30518 371 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SDC4P31431 198 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SCNN1AP37088 669 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 PXNP49023 591 aaPredicted RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 CXCR3P49682 368 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 KRT83P78385 493 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SATB1Q01826 763 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 RING1Q06587 406 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 AUHQ13825 339 aaKnown RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SLC18A3Q16572 532 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 TSR1Q2NL82 804 aaKnown RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 ALFQ53S48 1182 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SYT10Q6XYQ8 523 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 RALGPS2Q86X27 583 aaPredicted RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SUGP1Q8IWZ8 645 aaKnown RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 MAML2Q8IZL2 1156 aaPredicted RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 CARNMT1Q8N4J0 409 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF366Q8N895 744 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 MSANTD4Q8NCY6 345 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 RPLP0P6Q8NHW5 317 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 DDI1Q8WTU0 396 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 CYB5D2Q8WUJ1 264 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 WDR24Q96S15 920 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 NUP85Q9BW27 656 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SLC6A17Q9H1V8 727 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 DEF6Q9H4E7 631 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 C8orf33Q9H7E9 229 aaPredicted RBP8.18□□□□□ -1.1
CCDC40-215ENST00000576033 CD93Q9NPY3 652 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 ARHGEF4Q9NR80 690 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 ABCB8Q9NUT2 735 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 NDFIP2Q9NV92 336 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 FAM86C1Q9NVL1 165 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 MPP6Q9NZW5 540 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 MARK1Q9P0L2 795 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 TBC1D14Q9P2M4 693 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 TRIM10Q9UDY6 481 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 STOML2Q9UJZ1 356 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 STAP1Q9ULZ2 295 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 SIT1Q9Y3P8 196 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 MFHAS1Q9Y4C4 1052 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 HYOU1Q9Y4L1 999 aa8.18□□□□□ -1.1
CCDC40-215ENST00000576033 MYO18AQ92614 2054 aaKnown RBP8.17□□□□□ -1.1
CCDC40-215ENST00000576033 DNAH14Q0VDD8 3507 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 TMEM191CA6NGB0 347 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 WASH3PC4AMC7 463 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 SLC9A3R1O14745 358 aaPredicted RBP8.17□□□□□ -1.1
CCDC40-215ENST00000576033 AKR1B10O60218 316 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 ADAM23O75077 832 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 LRCH4O75427 683 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 ENDOD1O94919 500 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 KAT7O95251 611 aa8.17□□□□□ -1.1
CCDC40-215ENST00000576033 CYP1A2P05177 515 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms