RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SNRPFP62306 86 aaKnown RBP16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 GABREP78334 506 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 ASIC1P78348 528 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 EHHADHQ08426 723 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 PDE4CQ08493 712 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 VAC14Q08AM6 782 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 SFSWAPQ12872 951 aaKnown RBP16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 FAM26FQ5R3K3 315 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 FAM217AQ8IXS0 508 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 PARD3BQ8TEW8 1205 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 LRRC27Q9C0I9 530 aa16.97■□□□□ 0.31
CTDNEP1-211ENST00000575783 SIGLEC6O43699 453 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 SIN3BO75182 1162 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 ASPAP45381 313 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 CSRP3P50461 194 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 YWHAGP61981 247 aaKnown RBP eCLIP16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 CST6Q15828 149 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 PROX2Q3B8N5 592 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 KIAA1614Q5VZ46 1190 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 SPATS2Q86XZ4 545 aaKnown RBP16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 MMAAQ8IVH4 418 aaKnown RBP16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 LSMEM2Q8N112 164 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 ARHGAP18Q8N392 663 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 OXR1Q8N573 874 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 PLD4Q96BZ4 506 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 NT5C1AQ9BXI3 368 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 DUSP16Q9BY84 665 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 ERVMER34-1Q9H9K5 563 aa16.96■□□□□ 0.31
CTDNEP1-211ENST00000575783 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 TRIM38O00635 465 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 USP12O75317 370 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 RPN1P04843 607 aaKnown RBP16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 CD58P19256 250 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 CD70P32970 193 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 CCR5P51681 352 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 ST8SIA6P61647 398 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 DLG4P78352 724 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 DAB2P98082 770 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 SRSF1Q07955 248 aaKnown RBP eCLIP16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 TRIP4Q15650 581 aaPredicted RBP16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 KANSL1Q7Z3B3 1105 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 KIAA0907Q7Z7F0 614 aaPredicted RBP16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 OR14C36Q8NHC7 312 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 TRIM4Q9C037 500 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 TNMDQ9H2S6 317 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 TFIP11Q9UBB9 837 aaKnown RBP16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 BOD1L1Q8NFC6 3051 aa16.95■□□□□ 0.3
CTDNEP1-211ENST00000575783 SLC8A1P32418 973 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 SGSHP51688 502 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 CLDN10P78369 228 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 PPP1R26Q5T8A7 1209 aaPredicted RBP16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 WFDC5Q8TCV5 224 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 TAF4BQ92750 862 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 DPH1Q9BZG8 443 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 IL17BQ9UHF5 180 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 FZD4Q9ULV1 537 aa16.94■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3DA0A087WVF3 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3IA0A087WXS9 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3EA0A087X179 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3KA0A087X1G2 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3FA6NER0 549 aaPredicted RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3LB9A6J9 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBL1XO60907 577 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 ASS1P00966 412 aaKnown RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3HP0C7X1 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 LSSP48449 732 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 ERVPABLB-1P60509 514 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 AMPD3Q01432 767 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 ZNF211Q13398 564 aaPredicted RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 HNRNPA1L2Q32P51 320 aaKnown RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 ZACNQ401N2 412 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 ZNF394Q53GI3 561 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 ADGRF1Q5T601 910 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3GQ6DHY5 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3CQ6IPX1 549 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TMC6Q7Z403 805 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 C12orf56Q8IXR9 622 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 TBC1D3Q8IZP1 549 aaPredicted RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 MFSD2AQ8NA29 543 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 NDRG1Q92597 394 aaKnown RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 VCPIP1Q96JH7 1222 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 OSBPL2Q9H1P3 480 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 SLC39A2Q9NP94 309 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 KBTBD4Q9NVX7 518 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 CGNQ9P2M7 1197 aaKnown RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 SFMBT1Q9UHJ3 866 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 HEMK1Q9Y5R4 338 aaPredicted RBP16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 UBE4BO95155 1302 aa16.93■□□□□ 0.3
CTDNEP1-211ENST00000575783 MYLKQ15746 1914 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 OPA1O60313 960 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 GOT1P17174 413 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 PIK3CAP42336 1068 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 PSMD8P48556 350 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 ZNF445P59923 1031 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 INCA1Q0VD86 236 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 NFATC3Q12968 1075 aa16.92■□□□□ 0.3
CTDNEP1-211ENST00000575783 KNOP1Q1ED39 458 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms