RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PPP1R26Q5T8A7 1209 aaPredicted RBP9.38□□□□□ -0.91
SMG6-218ENST00000575454 BROXQ5VW32 411 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 MBLAC2Q68D91 279 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 PM20D1Q6GTS8 502 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 FAM173BQ6P4H8 233 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 FBXL19Q6PCT2 694 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 GATAD2AQ86YP4 633 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 CCDC117Q8IWD4 279 aaPredicted RBP9.38□□□□□ -0.91
SMG6-218ENST00000575454 EID2Q8N6I1 236 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 DCBLD1Q8N8Z6 715 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 OR2T34Q8NGX1 318 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 ELMO3Q96BJ8 720 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 SLC6A18Q96N87 628 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 ZNF396Q96N95 335 aaPredicted RBP9.38□□□□□ -0.91
SMG6-218ENST00000575454 OMDQ99983 421 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 FZD4Q9ULV1 537 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 CLCA2Q9UQC9 943 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 MGAQ8IWI9 3026 aa9.38□□□□□ -0.91
SMG6-218ENST00000575454 TLR4O00206 839 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 CALUO43852 315 aaPredicted RBP9.37□□□□□ -0.91
SMG6-218ENST00000575454 BRINP1O60477 761 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 CUTAO60888 179 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 RNASEH2AO75792 299 aaKnown RBP9.37□□□□□ -0.91
SMG6-218ENST00000575454 NR3C1P04150 777 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 CD58P19256 250 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 NUDT1P36639 197 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 SLC11A2P49281 568 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 VAMP7P51809 220 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 NXPH1P58417 271 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 CXADRP78310 365 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 DLG4P78352 724 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 OVGP1Q12889 678 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 CST6Q15828 149 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 HNRNPA1L2Q32P51 320 aaKnown RBP9.37□□□□□ -0.91
SMG6-218ENST00000575454 HS1BP3Q53T59 392 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 PRAMEF14Q5SWL7 426 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 ARHGAP17Q68EM7 881 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 SPOPLQ6IQ16 392 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 NCEH1Q6PIU2 408 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 INTS8Q75QN2 995 aaKnown RBP9.37□□□□□ -0.91
SMG6-218ENST00000575454 PIGZQ86VD9 579 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 IQCHQ86VS3 1027 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 FMNL3Q8IVF7 1028 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 UNC45BQ8IWX7 931 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 SPACA3Q8IXA5 215 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 LSMEM2Q8N112 164 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 ZNF366Q8N895 744 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 ANKRD52Q8NB46 1076 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 ZNF248Q8NDW4 579 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 TTC17Q96AE7 1141 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 SERAC1Q96JX3 654 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 ZNF578Q96N58 590 aaPredicted RBP9.37□□□□□ -0.91
SMG6-218ENST00000575454 IPO9Q96P70 1041 aaKnown RBP9.37□□□□□ -0.91
SMG6-218ENST00000575454 LGMNQ99538 433 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 DDX50Q9BQ39 737 aaKnown RBP9.37□□□□□ -0.91
SMG6-218ENST00000575454 BLZF1Q9H2G9 400 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 FAM13BQ9NYF5 915 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 ADAMTS1Q9UHI8 967 aa9.37□□□□□ -0.91
SMG6-218ENST00000575454 A0A1W2PR77 199 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 TARSL2A2RTX5 802 aaKnown RBP9.36□□□□□ -0.91
SMG6-218ENST00000575454 TYW5A2RUC4 315 aaKnown RBP9.36□□□□□ -0.91
SMG6-218ENST00000575454 POLR2DO15514 142 aaKnown RBP9.36□□□□□ -0.91
SMG6-218ENST00000575454 ADH1BP00325 375 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 KRT13P13646 458 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 GOT1P17174 413 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 ACP1P24666 158 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 GTF2H1P32780 548 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 TKTL1P51854 596 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 PCBP4P57723 403 aaKnown RBP9.36□□□□□ -0.91
SMG6-218ENST00000575454 TMPRSS3P57727 454 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 CCDC173Q0VFZ6 552 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 KCNH2Q12809 1159 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 SHBQ15464 509 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 SFMBT2Q5VUG0 894 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 CEP135Q66GS9 1140 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 ERICH1Q86X53 443 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 MFSD2AQ8NA29 543 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 NEUROG2Q9H2A3 272 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 LRRC4Q9HBW1 653 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 APOBEC3GQ9HC16 384 aaKnown RBP9.36□□□□□ -0.91
SMG6-218ENST00000575454 ABCC13Q9NSE7 274 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 EXOC1Q9NV70 894 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 MTMR6Q9Y217 621 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 PLXND1Q9Y4D7 1925 aa9.36□□□□□ -0.91
SMG6-218ENST00000575454 KIAA1549LQ6ZVL6 1849 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 EDDM13A0A1B0GTR0 161 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 A0A1W2PP55 124 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 CBX4O00257 560 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 XPO1O14980 1071 aaKnown RBP9.35□□□□□ -0.91
SMG6-218ENST00000575454 MID1O15344 667 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 TBL1XO60907 577 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 OBSL1O75147 1896 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 SIN3BO75182 1162 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 MOCS3O95396 460 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 YEATS4O95619 227 aa9.35□□□□□ -0.91
SMG6-218ENST00000575454 MT-CO3P00414 261 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms