RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 TBL1XO60907 577 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 SMC2O95347 1197 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 CAPNS1P04632 268 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 POLR2EP19388 210 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 CD70P32970 193 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 FMO5P49326 533 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 CSNK1EP49674 416 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 RGS7P49802 495 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 CCT8P50990 548 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 PMS1P54277 932 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 RPS14P62263 151 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 LRMPQ12912 555 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 SUZ12Q15022 739 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 KIF19Q2TAC6 998 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 FAM133BQ5BKY9 247 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 PIK3R6Q5UE93 754 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 ZNF776Q68DI1 518 aaPredicted RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 ANKRD40Q6AI12 368 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 RFWD3Q6PCD5 774 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 LCLAT1Q6UWP7 414 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 CCNI2Q6ZMN8 369 aaPredicted RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 SLCO6A1Q86UG4 719 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 MFN1Q8IWA4 741 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 FMR1NBQ8N0W7 255 aaPredicted RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 HJURPQ8NCD3 748 aaPredicted RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 WFDC5Q8TCV5 224 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 RHBDD1Q8TEB9 315 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 SLC35F5Q8WV83 523 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 NT5C1BQ96P26 610 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 CCDC86Q9H6F5 360 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 SGK2Q9HBY8 427 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 METTL14Q9HCE5 456 aaKnown RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 TM9SF3Q9HD45 589 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 OSGEPQ9NPF4 335 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 PRSS16Q9NQE7 514 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 KIAA1522Q9P206 1035 aaPredicted RBP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.86□□□□□ -0.67
TVP23B-208ENST00000575261 TMEM131Q92545 1883 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 PTPRBP23467 1997 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 ACACAQ13085 2346 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 IGSF10Q6WRI0 2623 aa10.86□□□□□ -0.67
TVP23B-208ENST00000575261 APC2O95996 2303 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 TAF4O00268 1085 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 PIK3R2O00459 728 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 PSMA7O14818 248 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 ACSL4O60488 711 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 FBXO21O94952 628 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 FSBPO95073 299 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 LTFP02788 710 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 CD27P26842 260 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 SLC6A4P31645 630 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 GRK6P43250 576 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 TBX4P57082 545 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 ST8SIA6P61647 398 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 CETN1Q12798 172 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 STIM1Q13586 685 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 CDH18Q13634 790 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 INAVAQ3KP66 663 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 PMF1Q6P1K2 205 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 LRSAM1Q6UWE0 723 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 DBX2Q6ZNG2 339 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 ADAT2Q7Z6V5 191 aaKnown RBP10.85□□□□□ -0.67
TVP23B-208ENST00000575261 PPM1KQ8N3J5 372 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 ENGASEQ8NFI3 743 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 TFAP2BQ92481 460 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 SMARCE1Q969G3 411 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 IGSF8Q969P0 613 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 BIRC7Q96CA5 298 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 HSFY1Q96LI6 401 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 PRICKLE1Q96MT3 831 aaPredicted RBP10.85□□□□□ -0.67
TVP23B-208ENST00000575261 SERPINB11Q96P15 392 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 DDX50Q9BQ39 737 aaKnown RBP10.85□□□□□ -0.67
TVP23B-208ENST00000575261 TOR4AQ9NXH8 423 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 SUN2Q9UH99 717 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 HOOK1Q9UJC3 728 aaKnown RBP10.85□□□□□ -0.67
TVP23B-208ENST00000575261 SCML1Q9UN30 329 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 ANKRD6Q9Y2G4 727 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 PCDHB4Q9Y5E5 795 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 SNX11Q9Y5W9 270 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 SLCO1B1Q9Y6L6 691 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 PLXNB3Q9ULL4 1909 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 KNL1Q8NG31 2342 aa10.85□□□□□ -0.67
TVP23B-208ENST00000575261 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
TVP23B-208ENST00000575261 TP53BP1Q12888 1972 aaPredicted RBP10.85□□□□□ -0.67
TVP23B-208ENST00000575261 CABIN1Q9Y6J0 2220 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 GOLGA6L4A6NEF3 574 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 PMM2O15305 246 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 SART1O43290 800 aaKnown RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 RNASEH1O60930 286 aaKnown RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 DKK1O94907 266 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 ASLP04424 464 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 BRD2P25440 801 aaKnown RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 CSKP41240 450 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 SFSWAPQ12872 951 aaKnown RBP10.84□□□□□ -0.67
TVP23B-208ENST00000575261 NNTQ13423 1086 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 CNGA2Q16280 664 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 CCDC40Q4G0X9 1142 aa10.84□□□□□ -0.67
TVP23B-208ENST00000575261 LAYNQ6UX15 382 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms