RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 IFI16Q16666 785 aaKnown RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 USP39Q53GS9 565 aaKnown RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 EGFLAMQ63HQ2 1017 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 BEND5Q7L4P6 421 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 DGLUCYQ7Z3D6 616 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 CEP112Q8N8E3 955 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 STK32AQ8WU08 396 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 RNF139Q8WU17 664 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 NDRG1Q92597 394 aaKnown RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 PIWIL1Q96J94 861 aaKnown RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 RTKNQ9BST9 563 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 SLC2A11Q9BYW1 496 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 IRX2Q9BZI1 471 aaPredicted RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 TPSD1Q9BZJ3 242 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 CDV3Q9UKY7 258 aaKnown RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 REXO2Q9Y3B8 237 aaKnown RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 PCDHA13Q9Y5I0 950 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 FHOD1Q9Y613 1164 aa11.02□□□□□ -0.65
LITAF-216ENST00000574848 MYO18AQ92614 2054 aaKnown RBP11.02□□□□□ -0.65
LITAF-216ENST00000574848 CKAP5Q14008 2032 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 NUP205Q92621 2012 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 TCRBV21S2A2A0A5A6 115 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 BCLAF3A2AJT9 711 aaKnown RBP11.01□□□□□ -0.65
LITAF-216ENST00000574848 SLC30A4O14863 429 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 DCLK1O15075 740 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 NPC1O15118 1278 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 PJA2O43164 708 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 SART1O43290 800 aaKnown RBP11.01□□□□□ -0.65
LITAF-216ENST00000574848 LTFP02788 710 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 HMBSP08397 361 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 LCP1P13796 627 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 HOXB2P14652 356 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 SOX5P35711 763 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 HARS2P49590 506 aaKnown RBP11.01□□□□□ -0.65
LITAF-216ENST00000574848 RGS7P49802 495 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 JAM2P57087 298 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 NNTQ13423 1086 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 EIF4HQ15056 248 aaKnown RBP11.01□□□□□ -0.65
LITAF-216ENST00000574848 ASTE1Q2TB18 679 aaPredicted RBP11.01□□□□□ -0.65
LITAF-216ENST00000574848 SPDYCQ5MJ68 293 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 HGSNATQ68CP4 663 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 DENND1CQ8IV53 801 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 RNF10Q8N5U6 811 aaKnown RBP11.01□□□□□ -0.65
LITAF-216ENST00000574848 SHC3Q92529 594 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 EDEM1Q92611 657 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 SPACA7Q96KW9 195 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 WDR24Q96S15 920 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.01□□□□□ -0.65
LITAF-216ENST00000574848 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 ARRDC1-AS1Q9H2J1 176 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 SIX2Q9NPC8 291 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 ZDHHC4Q9NPG8 344 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 VPS45Q9NRW7 570 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 PLK2Q9NYY3 685 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 DNAJC12Q9UKB3 198 aa11.01□□□□□ -0.65
LITAF-216ENST00000574848 F8VZ95 297 aa11□□□□□ -0.65
LITAF-216ENST00000574848 MSI1O43347 362 aaKnown RBP11□□□□□ -0.65
LITAF-216ENST00000574848 MED7O43513 233 aa11□□□□□ -0.65
LITAF-216ENST00000574848 CALCAP01258 141 aa11□□□□□ -0.65
LITAF-216ENST00000574848 CYBBP04839 570 aa11□□□□□ -0.65
LITAF-216ENST00000574848 FYNP06241 537 aa11□□□□□ -0.65
LITAF-216ENST00000574848 C7P10643 843 aa11□□□□□ -0.65
LITAF-216ENST00000574848 GABRG2P18507 467 aa11□□□□□ -0.65
LITAF-216ENST00000574848 BCKDHBP21953 392 aa11□□□□□ -0.65
LITAF-216ENST00000574848 HOXD9P28356 352 aaPredicted RBP11□□□□□ -0.65
LITAF-216ENST00000574848 GNA15P30679 374 aa11□□□□□ -0.65
LITAF-216ENST00000574848 ACADSBP45954 432 aa11□□□□□ -0.65
LITAF-216ENST00000574848 ATXN1P54253 815 aaKnown RBP11□□□□□ -0.65
LITAF-216ENST00000574848 ARID5AQ03989 594 aa11□□□□□ -0.65
LITAF-216ENST00000574848 WHAMMP3Q1A5X7 153 aa11□□□□□ -0.65
LITAF-216ENST00000574848 MAP7D1Q3KQU3 841 aa11□□□□□ -0.65
LITAF-216ENST00000574848 MPPE1Q53F39 396 aa11□□□□□ -0.65
LITAF-216ENST00000574848 MPP7Q5T2T1 576 aa11□□□□□ -0.65
LITAF-216ENST00000574848 ADGRF1Q5T601 910 aa11□□□□□ -0.65
LITAF-216ENST00000574848 PEAR1Q5VY43 1037 aaPredicted RBP11□□□□□ -0.65
LITAF-216ENST00000574848 NUGGCQ68CJ6 796 aa11□□□□□ -0.65
LITAF-216ENST00000574848 ANKS1BQ7Z6G8 1248 aa11□□□□□ -0.65
LITAF-216ENST00000574848 CHPFQ8IZ52 775 aa11□□□□□ -0.65
LITAF-216ENST00000574848 SLC35F6Q8N357 371 aa11□□□□□ -0.65
LITAF-216ENST00000574848 DDX51Q8N8A6 666 aaKnown RBP eCLIP11□□□□□ -0.65
LITAF-216ENST00000574848 CLEC4CQ8WTT0 213 aa11□□□□□ -0.65
LITAF-216ENST00000574848 AZIN2Q96A70 460 aa11□□□□□ -0.65
LITAF-216ENST00000574848 NOX5Q96PH1 765 aa11□□□□□ -0.65
LITAF-216ENST00000574848 ACOX2Q99424 681 aa11□□□□□ -0.65
LITAF-216ENST00000574848 TRIM62Q9BVG3 475 aa11□□□□□ -0.65
LITAF-216ENST00000574848 UBE2TQ9NPD8 197 aaPredicted RBP11□□□□□ -0.65
LITAF-216ENST00000574848 SFMBT1Q9UHJ3 866 aa11□□□□□ -0.65
LITAF-216ENST00000574848 INTUQ9ULD6 942 aa11□□□□□ -0.65
LITAF-216ENST00000574848 MRFAP1Q9Y605 127 aa11□□□□□ -0.65
LITAF-216ENST00000574848 THADAQ6YHU6 1953 aa10.99□□□□□ -0.65
LITAF-216ENST00000574848 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.99□□□□□ -0.65
LITAF-216ENST00000574848 BTNL10A8MVZ5 291 aa10.99□□□□□ -0.65
LITAF-216ENST00000574848 EFCAB8A8MWE9 144 aa10.99□□□□□ -0.65
LITAF-216ENST00000574848 PLEKP08567 350 aaPredicted RBP10.99□□□□□ -0.65
LITAF-216ENST00000574848 KRT5P13647 590 aa10.99□□□□□ -0.65
LITAF-216ENST00000574848 NDUFV2P19404 249 aa10.99□□□□□ -0.65
LITAF-216ENST00000574848 GBP1P32455 592 aa10.99□□□□□ -0.65
LITAF-216ENST00000574848 GFPT1Q06210 699 aaPredicted RBP10.99□□□□□ -0.65
LITAF-216ENST00000574848 CKAP4Q07065 602 aaKnown RBP10.99□□□□□ -0.65
LITAF-216ENST00000574848 BYSLQ13895 437 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms